MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP088138 Location: 1026619..1037045 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Accession: NZ_CP088138 Location: 1026619..1037045 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS04940 (1021732) | 1021732..1022112 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| LRM92_RS04945 (1022168) | 1022168..1024735 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LRM92_RS04950 (1024894) | 1024894..1025415 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| LRM92_RS04955 (1025587) | 1025587..1026243 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LRM92_RS04960 (1026590) | 1026590..1026795 | + | 206 | Protein_977 | IS5 family transposase ISEcl3 | Transposase |
| LRM92_RS04965 (1026868) | 1026868..1027395 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LRM92_RS04970 (1027392) | 1027392..1027682 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LRM92_RS04975 (1027952) | 1027952..1028130 | - | 179 | Protein_980 | IS3 family transposase | - |
| LRM92_RS04980 (1028371) | 1028371..1028697 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| LRM92_RS04985 (1028970) | 1028970..1029317 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LRM92_RS04990 (1029302) | 1029302..1029751 | - | 450 | WP_000381610.1 | membrane protein | - |
| LRM92_RS04995 (1030182) | 1030182..1030625 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| LRM92_RS05000 (1031082) | 1031082..1031732 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| LRM92_RS05005 (1031729) | 1031729..1033417 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| LRM92_RS05010 (1033414) | 1033414..1034532 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| LRM92_RS05015 (1034557) | 1034557..1036614 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| LRM92_RS05020 (1036638) | 1036638..1037045 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| LRM92_RS05025 (1037042) | 1037042..1038337 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| LRM92_RS05030 (1038315) | 1038315..1038758 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| LRM92_RS05035 (1038758) | 1038758..1039768 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| LRM92_RS05040 (1039768) | 1039768..1040679 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| LRM92_RS05045 (1040669) | 1040669..1041343 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| LRM92_RS05050 (1041369) | 1041369..1041629 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |