MGE detailed information
MGE type: Genomic_island MGE length: 11363 bp
Accession: NZ_CP088136 Location: 831873..843235 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SCPM-O-B-4515 Replicon: chromosome
Accession: NZ_CP088136 Location: 831873..843235 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SCPM-O-B-4515 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM91_RS04005 (827319) | 827319..828417 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LRM91_RS04010 (828427) | 828427..829944 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LRM91_RS04015 (830020) | 830020..830565 | - | 546 | WP_249895478.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LRM91_RS04020 (830830) | 830830..831588 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LRM91_RS04030 (831873) | 831873..832679 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LRM91_RS04035 (832959) | 832959..833210 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LRM91_RS04040 (833419) | 833419..833646 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LRM91_RS04045 (833646) | 833646..834044 | + | 399 | WP_249895479.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LRM91_RS04050 (834853) | 834853..835389 | + | 537 | WP_249895480.1 | Aminoglycoside N(6')-acetyltransferase type 1 | VF |
| LRM91_RS04055 (835436) | 835436..836068 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LRM91_RS04060 (836787) | 836787..837368 | + | 582 | WP_001244651.1 | PTS-dependent dihydroxyacetone kinase 2, dihydroxyacetone-binding subunit DhaK | VF |
| LRM91_RS04065 (837488) | 837488..839977 | + | 2490 | WP_249895481.1 | Erythritol/L-threitol dehydrogenase | VF |
| LRM91_RS04070 (840018) | 840018..840761 | + | 744 | WP_000798504.1 | NAD-dependent glycerol dehydrogenase | VF |
| LRM91_RS04075 (840758) | 840758..841834 | + | 1077 | WP_249895482.1 | hypothetical protein | - |
| LRM91_RS04080 (841978) | 841978..842490 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LRM91_RS04085 (842477) | 842477..843235 | + | 759 | WP_001747400.1 | hypothetical protein | - |
| LRM91_RS04090 (843445) | 843445..844311 | - | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| LRM91_RS04095 (844433) | 844433..844705 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LRM91_RS04100 (844736) | 844736..845965 | - | 1230 | WP_249895483.1 | amino acid permease | - |
| LRM91_RS04105 (846107) | 846107..846562 | - | 456 | WP_047606495.1 | multidrug/biocide efflux PACE transporter | - |
| LRM91_RS04110 (846666) | 846666..847529 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.01 |