MGE detailed information
MGE type: Prophage MGE length: 18878 bp
Accession: NZ_CP087688 Location: 30465..49342 Organism: Xylella taiwanensis strain PLS413 Replicon: chromosome
Accession: NZ_CP087688 Location: 30465..49342 Organism: Xylella taiwanensis strain PLS413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LPH64_RS00130 (LPH64_00130) | 27473..29548 | + | 2076 | WP_230428285.1 | S46 family peptidase | - |
LPH64_RS00135 (LPH64_00135) | 29655..30299 | + | 645 | WP_038272466.1 | histidine phosphatase family protein | - |
LPH64_RS00140 (LPH64_00140) | 30465..30809 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
LPH64_RS00145 (LPH64_00145) | 30845..31117 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
LPH64_RS00150 (LPH64_00150) | 31117..31377 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
LPH64_RS00155 (LPH64_00155) | 31466..32593 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
LPH64_RS00160 (LPH64_00160) | 32606..32950 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
LPH64_RS00165 (LPH64_00165) | 32953..34338 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
LPH64_RS00170 (LPH64_00170) | 34518..34754 | - | 237 | WP_230428212.1 | major capsid protein | - |
LPH64_RS00175 (LPH64_00175) | 34763..34969 | - | 207 | WP_038273075.1 | hypothetical protein | - |
LPH64_RS00180 (LPH64_00180) | 34972..35286 | - | 315 | WP_230428211.1 | hypothetical protein | - |
LPH64_RS00185 (LPH64_00185) | 35562..36149 | - | 588 | WP_038273076.1 | hypothetical protein | - |
LPH64_RS00190 (LPH64_00190) | 36346..36489 | - | 144 | WP_160165233.1 | hypothetical protein | - |
LPH64_RS00195 (LPH64_00195) | 36609..36809 | - | 201 | WP_038273077.1 | hypothetical protein | - |
LPH64_RS00200 (LPH64_00200) | 36858..37121 | - | 264 | WP_162814095.1 | hypothetical protein | - |
LPH64_RS00205 (LPH64_00205) | 37125..37286 | - | 162 | WP_160165236.1 | hypothetical protein | - |
LPH64_RS00210 (LPH64_00210) | 37576..37905 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
LPH64_RS00215 (LPH64_00215) | 37994..38494 | - | 501 | Protein_42 | Tyrosine recombinase XerC ; Integrase | Integrase |
LPH64_RS00220 (LPH64_00220) | 38942..39163 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
LPH64_RS00225 (LPH64_00225) | 39160..39483 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
LPH64_RS00230 (LPH64_00230) | 39584..40732 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
LPH64_RS00235 (LPH64_00235) | 40732..41073 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
LPH64_RS00240 (LPH64_00240) | 41077..42144 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
LPH64_RS00245 (LPH64_00245) | 42612..42830 | - | 219 | WP_051482398.1 | major capsid protein | - |
LPH64_RS00250 (LPH64_00250) | 42839..43048 | - | 210 | WP_230428208.1 | hypothetical protein | - |
LPH64_RS00255 (LPH64_00255) | 43048..43341 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
LPH64_RS00260 (LPH64_00260) | 43387..44535 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
LPH64_RS00265 (LPH64_00265) | 44966..45148 | - | 183 | WP_114867130.1 | hypothetical protein | - |
LPH64_RS00270 (LPH64_00270) | 45179..45403 | - | 225 | WP_160199341.1 | hypothetical protein | - |
LPH64_RS00280 (LPH64_00280) | 46050..46718 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
LPH64_RS00285 (LPH64_00285) | 47573..49342 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
LPH64_RS00290 (LPH64_00290) | 49664..50491 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
LPH64_RS00295 (LPH64_00295) | 50636..50928 | + | 293 | Protein_57 | recombinase family protein | - |
LPH64_RS00300 (LPH64_00300) | 50955..52134 | + | 1180 | Protein_58 | Tn3 family transposase | - |
LPH64_RS00305 (LPH64_00305) | 52178..53695 | - | 1518 | WP_038271625.1 | fumarate hydratase | - |
LPH64_RS00310 (LPH64_00310) | 53706..53951 | - | 246 | WP_038271623.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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