MGE detailed information
MGE type: Prophage MGE length: 16254 bp
Accession: NZ_CP087681 Location: 221..16474 Organism: Xylella taiwanensis strain PLS1133 Replicon: chromosome
Accession: NZ_CP087681 Location: 221..16474 Organism: Xylella taiwanensis strain PLS1133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH45_RS00010 (LPH45_00010) | 221..565 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH45_RS00015 (LPH45_00015) | 601..873 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH45_RS00020 (LPH45_00020) | 873..1133 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH45_RS00025 (LPH45_00025) | 1222..2349 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH45_RS00030 (LPH45_00030) | 2362..2706 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH45_RS00035 (LPH45_00035) | 2709..4094 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH45_RS00040 (LPH45_00040) | 4274..4510 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH45_RS00045 (LPH45_00045) | 4519..4725 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH45_RS00050 (LPH45_00050) | 4728..5042 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH45_RS00055 (LPH45_00055) | 5318..5905 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH45_RS00060 (LPH45_00060) | 6102..6245 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH45_RS00065 (LPH45_00065) | 6365..6565 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH45_RS00070 (LPH45_00070) | 6614..6877 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH45_RS00075 (LPH45_00075) | 6881..7042 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH45_RS00080 (LPH45_00080) | 7332..7661 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH45_RS00085 (LPH45_00085) | 7750..8250 | - | 501 | Protein_16 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH45_RS00090 (LPH45_00090) | 8698..8919 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH45_RS00095 (LPH45_00095) | 8916..9239 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH45_RS00100 (LPH45_00100) | 9340..10488 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH45_RS00105 (LPH45_00105) | 10488..10829 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH45_RS00110 (LPH45_00110) | 10833..11900 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH45_RS00115 (LPH45_00115) | 12368..12586 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH45_RS00120 (LPH45_00120) | 12595..12804 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH45_RS00125 (LPH45_00125) | 12804..13097 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH45_RS00130 (LPH45_00130) | 13143..14291 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH45_RS00135 (LPH45_00135) | 14722..14904 | - | 183 | WP_230431738.1 | hypothetical protein | - |
| LPH45_RS00140 (LPH45_00140) | 14935..15195 | - | 261 | WP_152536640.1 | hypothetical protein | - |
| LPH45_RS00150 (LPH45_00150) | 15806..16474 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH45_RS00155 (LPH45_00155) | 17329..19098 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH45_RS00160 (LPH45_00160) | 19420..20247 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH45_RS00165 (LPH45_00165) | 20392..20684 | + | 293 | Protein_31 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|