MGE detailed information
MGE type: Prophage MGE length: 16254 bp
Accession: NZ_CP087680 Location: 2773180..2789433 Organism: Xylella taiwanensis strain PLS407 Replicon: chromosome
Accession: NZ_CP087680 Location: 2773180..2789433 Organism: Xylella taiwanensis strain PLS407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH41_RS11630 (LPH41_11630) | 2768970..2769262 | - | 293 | Protein_2291 | recombinase family protein | - |
| LPH41_RS11635 (LPH41_11635) | 2769407..2770234 | + | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH41_RS11640 (LPH41_11640) | 2770556..2772325 | - | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH41_RS11645 (LPH41_11645) | 2773180..2773848 | + | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH41_RS11655 (LPH41_11655) | 2774495..2774719 | + | 225 | WP_160199341.1 | hypothetical protein | - |
| LPH41_RS11660 (LPH41_11660) | 2774750..2774932 | + | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH41_RS11665 (LPH41_11665) | 2775363..2776511 | + | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH41_RS11670 (LPH41_11670) | 2776557..2776850 | + | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH41_RS11675 (LPH41_11675) | 2776850..2777059 | + | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH41_RS11680 (LPH41_11680) | 2777068..2777286 | + | 219 | WP_051482398.1 | major capsid protein | - |
| LPH41_RS11685 (LPH41_11685) | 2777754..2778821 | + | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH41_RS11690 (LPH41_11690) | 2778825..2779166 | + | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH41_RS11695 (LPH41_11695) | 2779166..2780314 | + | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH41_RS11700 (LPH41_11700) | 2780415..2780738 | - | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH41_RS11705 (LPH41_11705) | 2780735..2780956 | - | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH41_RS11710 (LPH41_11710) | 2781404..2782210 | + | 807 | WP_230439338.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH41_RS11715 (LPH41_11715) | 2782173..2782322 | - | 150 | Protein_2307 | DUF3693 domain-containing protein | - |
| LPH41_RS11720 (LPH41_11720) | 2782612..2782773 | + | 162 | WP_230439292.1 | hypothetical protein | - |
| LPH41_RS11725 (LPH41_11725) | 2782777..2783040 | + | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH41_RS11730 (LPH41_11730) | 2783089..2783289 | + | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH41_RS11735 (LPH41_11735) | 2783409..2783552 | + | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH41_RS11740 (LPH41_11740) | 2783749..2784336 | + | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH41_RS11745 (LPH41_11745) | 2784612..2784926 | + | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH41_RS11750 (LPH41_11750) | 2784929..2785135 | + | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH41_RS11755 (LPH41_11755) | 2785144..2785380 | + | 237 | WP_230428212.1 | major capsid protein | - |
| LPH41_RS11760 (LPH41_11760) | 2785560..2786945 | + | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH41_RS11765 (LPH41_11765) | 2786948..2787292 | + | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH41_RS11770 (LPH41_11770) | 2787305..2788432 | + | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH41_RS11775 (LPH41_11775) | 2788521..2788781 | + | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH41_RS11780 (LPH41_11780) | 2788781..2789053 | + | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH41_RS11785 (LPH41_11785) | 2789089..2789433 | - | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH41_RS11790 (LPH41_11790) | 2789599..2790243 | - | 645 | WP_038272466.1 | histidine phosphatase family protein | - |
| LPH41_RS11795 (LPH41_11795) | 2790350..2792425 | - | 2076 | WP_230428285.1 | S46 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|