NZ_CP0876251..139857

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 139857 bp
Accession: NZ_CP087625        Location: 1..139857         Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD02280       Replicon: plasmid pDD02280-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LMH50_RS28160 (1) 1..858 + 858 WP_032495102.1 incFII family plasmid replication initiator RepA -
LMH50_RS28165 (1797) 1797..2450 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
LMH50_RS28170 (2543) 2543..2800 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
LMH50_RS28175 (2733) 2733..3134 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
LMH50_RS28180 (3383) 3383..3798 + 416 Protein_4 IS1-like element IS1B family transposase -
LMH50_RS28185 (3834) 3834..4379 - 546 Protein_5 Tn3 family transposase TnpA_Tn3 Transposase
LMH50_RS28190 (4445) 4445..5149 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28195 (5219) 5219..5410 + 192 Protein_7 IS1380 family transposase -
LMH50_RS28200 (5660) 5660..6535 + 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
LMH50_RS28205 (6570) 6570..7538 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
LMH50_RS28210 (7595) 7595..8692 + 1098 Protein_10 TonB-dependent receptor -
LMH50_RS28215 (8760) 8760..9236 - 477 Protein_11 PAS domain-containing protein -
LMH50_RS28220 (9289) 9289..9993 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28225 (10058) 10058..10648 + 591 Protein_13 IS91 family transposase ISSbo1 Transposase
LMH50_RS28230 (11104) 11104..11808 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28235 (11859) 11859..12476 - 618 Protein_15 IS91 family transposase ISSbo1 Transposase
LMH50_RS28240 (12486) 12486..12674 - 189 WP_000957857.1 hypothetical protein -
LMH50_RS28245 (12766) 12766..13302 + 537 WP_064441864.1 Tn3 family transposase TnpR_Tn3 Transposase
LMH50_RS28250 (13485) 13485..14345 + 861 WP_000027057.1 Beta-lactamase TEM ARG
LMH50_RS28255 (14515) 14515..15270 + 756 WP_012372818.1 16S rRNA (guanine(1405)-N(7))-methyltransferase ARG
LMH50_RS28260 (15351) 15351..15665 - 315 Protein_20 hypothetical protein -
LMH50_RS28265 (15720) 15720..16424 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28270 (16490) 16490..16555 + 66 Protein_22 IS1 family transposase -
LMH50_RS28275 (17916) 17916..18896 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
LMH50_RS28280 (19204) 19204..19438 + 235 Protein_24 type II toxin-antitoxin system RelE/ParE family toxin -
LMH50_RS28285 (19566) 19566..19847 + 282 WP_001333089.1 hypothetical protein -
LMH50_RS28290 (19970) 19970..20320 - 351 WP_000361389.1 plasmid partitioning/stability family protein -
LMH50_RS28295 (20323) 20323..21285 - 963 WP_000959884.1 plasmid segregation protein ParM -
LMH50_RS28300 (21432) 21432..21725 + 294 WP_032146011.1 hypothetical protein -
LMH50_RS28305 (21802) 21802..22485 + 684 WP_000085883.1 DNA methylase -
LMH50_RS28310 (22486) 22486..22707 + 222 WP_001104881.1 hypothetical protein -
LMH50_RS28315 (22721) 22721..23155 + 435 WP_000274503.1 DUF1380 family protein -
LMH50_RS28320 (23206) 23206..23982 + 777 WP_001383963.1 hypothetical protein -
LMH50_RS28325 (24400) 24400..24825 + 426 WP_001198928.1 antirestriction protein -
LMH50_RS28330 (24872) 24872..25294 + 423 WP_000271762.1 DUF1380 family protein -
LMH50_RS28335 (25291) 25291..25482 + 192 WP_001027493.1 hypothetical protein -
LMH50_RS28340 (25796) 25796..27463 - 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
LMH50_RS28345 (28192) 28192..28346 - 155 Protein_37 hypothetical protein -
LMH50_RS28350 (28863) 28863..29093 + 231 WP_000218642.1 hypothetical protein -
LMH50_RS28355 (29145) 29145..30506 + 1362 WP_000170695.1 DUF3560 domain-containing protein -
LMH50_RS28360 (30553) 30553..31116 + 564 WP_015059007.1 class I SAM-dependent methyltransferase -
LMH50_RS28365 (31202) 31202..31657 - 456 Protein_41 hypothetical protein -
LMH50_RS28370 (31959) 31959..32486 + 528 WP_000290834.1 single-stranded DNA-binding protein -
LMH50_RS28375 (32544) 32544..32777 + 234 WP_000006003.1 DUF905 family protein -
LMH50_RS28380 (32838) 32838..34861 + 2024 Protein_44 ParB/RepB/Spo0J family partition protein -
LMH50_RS28385 (34930) 34930..35364 + 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
LMH50_RS28390 (35361) 35361..36080 + 720 WP_001276217.1 plasmid SOS inhibition protein A -
- (36092) 36092..36316 + 225 NuclAT_0 - -
- (36092) 36092..36316 + 225 NuclAT_0 - -
- (36092) 36092..36316 + 225 NuclAT_0 - -
- (36092) 36092..36316 + 225 NuclAT_0 - -
LMH50_RS28395 (36302) 36302..36451 + 150 Protein_47 plasmid maintenance protein Mok -
LMH50_RS28400 (36393) 36393..36518 + 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
LMH50_RS28405 (36837) 36837..37133 - 297 Protein_49 hypothetical protein -
LMH50_RS28410 (37433) 37433..37729 + 297 WP_001272251.1 hypothetical protein -
LMH50_RS28415 (37840) 37840..38661 + 822 WP_001234445.1 DUF932 domain-containing protein -
LMH50_RS28420 (38958) 38958..39605 - 648 WP_015059008.1 hypothetical protein VF
LMH50_RS28425 (39882) 39882..40265 + 384 WP_000124981.1 conjugal transfer relaxosome DNA-binding protein TraM -
LMH50_RS28430 (40546) 40546..41250 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28435 (41304) 41304..41627 - 324 Protein_55 class II aldolase/adducin family protein -
LMH50_RS28440 (41620) 41620..42872 - 1253 Protein_56 four-carbon acid sugar kinase family protein -
LMH50_RS28445 (42884) 42884..43786 - 903 WP_002903955.1 NAD(P)-dependent oxidoreductase -
LMH50_RS28450 (44048) 44048..44809 + 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
LMH50_RS28455 (44830) 44830..45690 - 861 WP_002904004.1 Beta-lactamase SHV-2 ARG
LMH50_RS28460 (45827) 45827..46531 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28465 (46585) 46585..46908 - 324 Protein_61 class II aldolase/adducin family protein -
LMH50_RS28470 (46901) 46901..48153 - 1253 Protein_62 four-carbon acid sugar kinase family protein -
LMH50_RS28475 (48165) 48165..49067 - 903 WP_002903955.1 NAD(P)-dependent oxidoreductase -
LMH50_RS28480 (49329) 49329..50090 + 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
LMH50_RS28485 (50111) 50111..50971 - 861 WP_002904004.1 Beta-lactamase SHV-2 ARG
LMH50_RS28490 (51108) 51108..51176 + 69 Protein_66 IS6 family transposase -
LMH50_RS28495 (51212) 51212..54178 - 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
LMH50_RS28500 (54182) 54182..54742 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
LMH50_RS28505 (55134) 55134..55751 + 618 Protein_69 replication protein -
LMH50_RS28510 (56285) 56285..56563 + 279 WP_013213990.1 hypothetical protein -
LMH50_RS28515 (56674) 56674..57099 + 426 WP_013213989.1 antirestriction protein -
LMH50_RS28520 (57227) 57227..57382 + 156 WP_013213988.1 hypothetical protein -
LMH50_RS28525 (57428) 57428..57724 + 297 WP_013213987.1 transcriptional regulator -
LMH50_RS28530 (57828) 57828..58709 + 882 Protein_74 IS1182 family transposase ISKpn6 Transposase
LMH50_RS28535 (58959) 58959..59840 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
LMH50_RS28540 (60116) 60116..61096 - 981 WP_013213985.1 IS481 family transposase ISKpn27 Transposase
LMH50_RS28545 (61219) 61219..61680 - 462 Protein_77 Tn3 family transposase TnpR_Tn3 Transposase
LMH50_RS28550 (61732) 61732..62436 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS28555 (62501) 62501..63673 - 1173 Protein_79 transposase -
LMH50_RS28560 (63748) 63748..64416 - 669 WP_001300294.1 putative signaling protein VF
LMH50_RS28565 (64452) 64452..64688 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
LMH50_RS28570 (64685) 64685..65047 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
LMH50_RS28575 (65065) 65065..66759 - 1695 WP_000105636.1 mercury(II) reductase -
LMH50_RS28580 (66811) 66811..67233 - 423 WP_001340589.1 organomercurial transporter MerC -
LMH50_RS28585 (67269) 67269..67544 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
LMH50_RS28590 (67558) 67558..67908 - 351 WP_001294663.1 mercuric transport protein MerT -
LMH50_RS28595 (67980) 67980..68414 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
LMH50_RS28600 (68493) 68493..69497 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
LMH50_RS28605 (70025) 70025..71425 - 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
LMH50_RS28610 (71422) 71422..72102 - 681 WP_001188930.1 Transcriptional activator protein CopR VF
LMH50_RS28615 (72157) 72157..73086 - 930 WP_004213583.1 copper resistance inner membrane protein PcoD -
LMH50_RS28620 (73091) 73091..73471 - 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
LMH50_RS28625 (73511) 73511..74401 - 891 WP_029884201.1 copper resistance outer membrane transporter PcoB -
LMH50_RS28630 (74407) 74407..76224 - 1818 WP_004213580.1 multicopper oxidase PcoA -
LMH50_RS28635 (76458) 76458..76925 + 468 WP_048336866.1 hypothetical protein -
LMH50_RS28640 (77192) 77192..77929 + 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
LMH50_RS28645 (77963) 77963..78160 - 198 WP_000843497.1 DUF2933 domain-containing protein -
LMH50_RS28650 (78201) 78201..80648 - 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
LMH50_RS28655 (80775) 80775..81215 - 441 WP_000758228.1 DUF411 domain-containing protein -
LMH50_RS28660 (81302) 81302..84448 - 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
LMH50_RS28665 (84459) 84459..85751 - 1293 WP_004213579.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
LMH50_RS28670 (85865) 85865..86227 - 363 WP_004213578.1 cation efflux system protein CusF -
LMH50_RS28675 (86256) 86256..87641 - 1386 WP_004213577.1 Cation efflux system protein CusC VF
LMH50_RS28680 (87831) 87831..88511 + 681 WP_004213574.1 Transcriptional regulatory protein CusR VF
LMH50_RS28685 (88504) 88504..89979 + 1476 WP_000555737.1 copper/silver sensor histidine kinase SilS -
LMH50_RS28690 (90230) 90230..90661 + 432 WP_023302802.1 silver-binding protein SilE -
LMH50_RS28695 (90805) 90805..91155 + 351 WP_004213569.1 DUF305 domain-containing protein -
LMH50_RS28700 (91542) 91542..92450 - 909 WP_023302803.1 HNH endonuclease -
LMH50_RS28705 (93087) 93087..94061 + 975 WP_004213565.1 sensor domain-containing diguanylate cyclase -
LMH50_RS28710 (94240) 94240..94485 + 246 Protein_110 hypothetical protein -
LMH50_RS28715 (94646) 94646..95590 + 945 WP_011977810.1 hypothetical protein -
LMH50_RS28720 (95627) 95627..96019 + 393 WP_011977811.1 hypothetical protein -
LMH50_RS28725 (96077) 96077..96598 + 522 WP_013214008.1 hypothetical protein -
LMH50_RS28730 (96644) 96644..96847 + 204 WP_011977813.1 hypothetical protein -
LMH50_RS28735 (96877) 96877..97881 + 1005 WP_011977814.1 hypothetical protein -
LMH50_RS28740 (98065) 98065..98844 + 780 WP_013214009.1 site-specific integrase -
LMH50_RS28745 (98890) 98890..99147 - 258 WP_013214010.1 hypothetical protein -
LMH50_RS28750 (99276) 99276..99389 - 114 WP_014343462.1 hypothetical protein -
LMH50_RS28755 (99925) 99925..100791 + 867 WP_004118283.1 replication initiation protein -
LMH50_RS28760 (101901) 101901..103106 + 1206 WP_011977818.1 AAA family ATPase -
LMH50_RS28765 (103106) 103106..104080 + 975 WP_011977819.1 ParB family protein -
LMH50_RS28770 (104162) 104162..105433 - 1272 WP_013214011.1 Y-family DNA polymerase -
LMH50_RS28775 (105433) 105433..105864 - 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
LMH50_RS28780 (106271) 106271..107758 + 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
LMH50_RS28785 (108007) 108007..108978 + 972 WP_004152353.1 plasmid segregation protein ParM -
LMH50_RS28790 (108981) 108981..109652 + 672 WP_013214012.1 plasmid partitioning/stability family protein -
LMH50_RS28795 (109715) 109715..109945 + 231 WP_001568040.1 hypothetical protein -
LMH50_RS28800 (110141) 110141..110310 + 170 Protein_128 hypothetical protein -
LMH50_RS28805 (110382) 110382..111083 + 702 WP_001568041.1 DNA methylase -
LMH50_RS28810 (111083) 111083..111304 + 222 WP_001568042.1 hypothetical protein -
LMH50_RS28815 (111314) 111314..111733 + 420 WP_001568043.1 DUF1380 domain-containing protein -
LMH50_RS28820 (111787) 111787..112554 + 768 WP_013214013.1 hypothetical protein -
LMH50_RS28825 (113235) 113235..113663 + 429 WP_001568045.1 antirestriction protein -
LMH50_RS28830 (113706) 113706..114212 + 507 WP_013214014.1 antirestriction protein ArdA -
LMH50_RS28835 (114255) 114255..114446 + 192 WP_001568047.1 hypothetical protein -
LMH50_RS28840 (114634) 114634..114888 + 255 WP_011977779.1 DNA polymerase III subunit theta -
LMH50_RS28845 (114923) 114923..115243 + 321 WP_001568049.1 hypothetical protein -
LMH50_RS28850 (115923) 115923..116150 + 228 WP_001568050.1 hypothetical protein -
LMH50_RS28855 (116242) 116242..116472 + 231 WP_001568051.1 hypothetical protein -
LMH50_RS28860 (116524) 116524..117879 + 1356 WP_014343515.1 DUF3560 domain-containing protein -
LMH50_RS28865 (117927) 117927..118490 + 564 WP_014343514.1 methyltransferase -
LMH50_RS28870 (119323) 119323..119865 + 543 WP_014343512.1 single-stranded DNA-binding protein -
LMH50_RS28875 (119914) 119914..120162 + 249 WP_001568055.1 DUF905 domain-containing protein -
LMH50_RS28880 (120232) 120232..122289 + 2058 WP_015493064.1 ParB/RepB/Spo0J family partition protein -
LMH50_RS28885 (122334) 122334..122765 + 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
LMH50_RS28890 (122762) 122762..123490 + 729 WP_001568058.1 plasmid SOS inhibition protein A -
LMH50_RS28895 (123487) 123487..123813 + 327 WP_013023807.1 hypothetical protein -
LMH50_RS28900 (123869) 123869..124243 + 375 WP_014343510.1 hypothetical protein -
LMH50_RS28905 (124413) 124413..124565 + 153 WP_004150508.1 DUF5431 family protein -
LMH50_RS28910 (124510) 124510..124629 + 120 WP_159376494.1 type I toxin-antitoxin system Hok family toxin -
LMH50_RS28915 (125322) 125322..125594 + 273 WP_040245921.1 hypothetical protein -
LMH50_RS28920 (125591) 125591..125941 + 351 WP_040245917.1 hypothetical protein -
LMH50_RS28925 (125956) 125956..126273 + 318 WP_014343505.1 hypothetical protein -
LMH50_RS28930 (127114) 127114..127470 + 357 WP_014343501.1 hypothetical protein -
LMH50_RS28935 (127531) 127531..127743 + 213 WP_014343500.1 hypothetical protein -
LMH50_RS28940 (127754) 127754..127978 + 225 WP_014343499.1 hypothetical protein -
LMH50_RS28945 (128059) 128059..128379 + 321 WP_014343498.1 type II toxin-antitoxin system RelE/ParE family toxin -
LMH50_RS28950 (128369) 128369..128647 + 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
LMH50_RS28955 (128651) 128651..128755 + 105 Protein_159 transcriptional regulator -
LMH50_RS28960 (129584) 129584..130405 + 822 WP_004152492.1 DUF932 domain-containing protein -
LMH50_RS28965 (130438) 130438..130767 + 330 WP_013214015.1 DUF5983 family protein -
LMH50_RS28970 (130800) 130800..131285 - 486 WP_014343495.1 hypothetical protein VF
LMH50_RS28975 (131676) 131676..132092 + 417 WP_014343494.1 conjugal transfer relaxosome DNA-binding protein TraM -
LMH50_RS28980 (132292) 132292..133029 + 738 WP_154244330.1 conjugal transfer protein TrbJ -
LMH50_RS28985 (133144) 133144..133350 + 207 WP_171773970.1 TraY domain-containing protein -
LMH50_RS28990 (133412) 133412..133780 + 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
LMH50_RS28995 (133794) 133794..134099 + 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
LMH50_RS29000 (134119) 134119..134484 + 366 Protein_168 type IV conjugative transfer system protein TraE -
LMH50_RS29005 (134539) 134539..135243 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH50_RS29010 (135268) 135268..135468 + 201 WP_072354025.1 hypothetical protein -
LMH50_RS29015 (135488) 135488..136234 + 747 WP_000205770.1 conjugal transfer pilus acetylase TraX -
LMH50_RS29020 (136289) 136289..136849 + 561 WP_000139328.1 fertility inhibition protein FinO -
LMH50_RS29025 (136981) 136981..137181 + 201 WP_015059022.1 hypothetical protein -
LMH50_RS29030 (137567) 137567..138166 + 600 WP_032083981.1 PIN domain-containing protein -
LMH50_RS29035 (138228) 138228..138560 + 333 WP_152916585.1 hypothetical protein -
- (138761) 138761..138820 - 60 NuclAT_1 - Antitoxin Detail
- (138761) 138761..138820 - 60 NuclAT_1 - Antitoxin Detail
- (138761) 138761..138820 - 60 NuclAT_1 - Antitoxin Detail
- (138761) 138761..138820 - 60 NuclAT_1 - Antitoxin Detail
LMH50_RS29040 (138865) 138865..139014 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
LMH50_RS29045 (139298) 139298..139546 + 249 WP_000083837.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance