MGE detailed information
MGE type: Conjugative plasmid MGE length: 106447 bp
Accession: NZ_CP087613 Location: 1..106447 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD02172 Replicon: plasmid pDD02172-2
Accession: NZ_CP087613 Location: 1..106447 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD02172 Replicon: plasmid pDD02172-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH59_RS27060 (19) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| LMH59_RS27065 (1559) | 1559..2185 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| LMH59_RS27070 (2182) | 2182..2484 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| LMH59_RS27075 (2972) | 2972..3766 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| LMH59_RS27080 (3964) | 3964..4980 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| LMH59_RS27085 (4991) | 4991..5305 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| LMH59_RS27090 (5332) | 5332..5727 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| LMH59_RS27095 (5896) | 5896..6201 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LMH59_RS27100 (6203) | 6203..6421 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LMH59_RS27105 (6591) | 6591..7052 | - | 462 | WP_160880186.1 | hypothetical protein | - |
| LMH59_RS27110 (7009) | 7009..7239 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LMH59_RS27115 (7236) | 7236..7652 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LMH59_RS27120 (7726) | 7726..9288 | + | 1563 | WP_004206609.1 | AAA family ATPase | - |
| LMH59_RS27125 (9273) | 9273..10295 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| LMH59_RS27130 (10551) | 10551..11248 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| LMH59_RS27135 (11277) | 11277..11549 | + | 273 | Protein_15 | IS5 family transposase ISPan1 | Transposase |
| LMH59_RS27140 (11829) | 11829..12833 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| LMH59_RS27145 (12912) | 12912..13346 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| LMH59_RS27150 (13418) | 13418..13768 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| LMH59_RS27155 (13782) | 13782..14057 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| LMH59_RS27160 (14093) | 14093..14515 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| LMH59_RS27165 (14567) | 14567..16261 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| LMH59_RS27170 (16279) | 16279..16641 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| LMH59_RS27175 (16638) | 16638..16874 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| LMH59_RS27180 (16910) | 16910..17578 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| LMH59_RS27185 (17653) | 17653..18903 | + | 1251 | Protein_25 | transposase | - |
| LMH59_RS27190 (18968) | 18968..19672 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH59_RS27195 (19724) | 19724..20185 | + | 462 | Protein_27 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LMH59_RS27200 (20308) | 20308..21288 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| LMH59_RS27205 (21564) | 21564..22445 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| LMH59_RS27210 (22695) | 22695..23576 | - | 882 | Protein_30 | IS1182 family transposase ISKpn6 | Transposase |
| LMH59_RS27215 (23680) | 23680..23976 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| LMH59_RS27220 (24022) | 24022..24177 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| LMH59_RS27225 (24305) | 24305..24730 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| LMH59_RS27230 (24841) | 24841..25119 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| LMH59_RS27235 (25653) | 25653..26231 | - | 579 | Protein_35 | replication protein | - |
| LMH59_RS27240 (26297) | 26297..27001 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH59_RS27245 (27056) | 27056..27391 | - | 336 | Protein_37 | class II aldolase/adducin family protein | - |
| LMH59_RS27250 (27384) | 27384..28636 | - | 1253 | Protein_38 | four-carbon acid sugar kinase family protein | - |
| LMH59_RS27255 (28648) | 28648..29550 | - | 903 | WP_002903955.1 | NAD(P)-dependent oxidoreductase | - |
| LMH59_RS27260 (29812) | 29812..30573 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LMH59_RS27265 (30594) | 30594..31454 | - | 861 | WP_004176269.1 | Beta-lactamase SHV-1 | ARG |
| LMH59_RS27270 (31591) | 31591..32295 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH59_RS27275 (32348) | 32348..32473 | - | 126 | Protein_43 | hypothetical protein | - |
| LMH59_RS27280 (32859) | 32859..33770 | - | 912 | WP_013213995.1 | hypothetical protein | - |
| LMH59_RS27285 (33822) | 33822..35764 | - | 1943 | Protein_45 | hypothetical protein | - |
| LMH59_RS27290 (35768) | 35768..36661 | - | 894 | WP_013213999.1 | hypothetical protein | - |
| LMH59_RS27295 (36669) | 36669..37910 | - | 1242 | WP_013213998.1 | N-6 DNA methylase | - |
| LMH59_RS27300 (39230) | 39230..40105 | - | 876 | WP_072101968.1 | incFII family plasmid replication initiator RepA | - |
| LMH59_RS27305 (40403) | 40403..40660 | - | 258 | WP_015344940.1 | replication regulatory protein RepA | - |
| LMH59_RS27310 (40792) | 40792..41343 | - | 552 | WP_015344941.1 | Phospholipase D | VF |
| LMH59_RS27315 (41447) | 41447..41755 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| LMH59_RS27320 (41752) | 41752..42402 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| LMH59_RS27325 (42458) | 42458..43102 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| LMH59_RS27330 (43152) | 43152..43754 | - | 603 | WP_013023836.1 | PIN domain-containing protein | - |
| LMH59_RS27335 (43915) | 43915..44508 | - | 594 | WP_015344942.1 | fertility inhibition protein FinO | - |
| LMH59_RS27340 (44580) | 44580..45305 | - | 726 | WP_015344943.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LMH59_RS27345 (45349) | 45349..50610 | - | 5262 | WP_064291677.1 | Multifunctional conjugation protein TraI | Relaxase |
| LMH59_RS27350 (50610) | 50610..52922 | - | 2313 | WP_232152220.1 | type IV conjugative transfer system coupling protein TraD | - |
| LMH59_RS27355 (53049) | 53049..53738 | - | 690 | WP_014343485.1 | hypothetical protein | - |
| LMH59_RS27360 (53931) | 53931..54662 | - | 732 | WP_013214036.1 | conjugal transfer complement resistance protein TraT | - |
| LMH59_RS27365 (54913) | 54913..55515 | - | 603 | WP_013214035.1 | conjugal transfer protein TraS | - |
| LMH59_RS27370 (55538) | 55538..58360 | - | 2823 | WP_013214034.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LMH59_RS27375 (58360) | 58360..59739 | - | 1380 | WP_074160414.1 | conjugal transfer pilus assembly protein TraH | - |
| LMH59_RS27380 (59717) | 59717..60160 | - | 444 | WP_013214032.1 | F-type conjugal transfer protein TrbF | - |
| LMH59_RS27385 (60206) | 60206..60763 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LMH59_RS27390 (60735) | 60735..60974 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH59_RS27395 (60985) | 60985..61737 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LMH59_RS27400 (61758) | 61758..62084 | - | 327 | WP_013214030.1 | hypothetical protein | - |
| LMH59_RS27405 (62097) | 62097..62345 | - | 249 | WP_013214029.1 | hypothetical protein | - |
| LMH59_RS27410 (62323) | 62323..62547 | - | 225 | WP_139615448.1 | conjugal transfer protein TrbE | - |
| LMH59_RS27415 (62592) | 62592..63572 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| LMH59_RS27420 (63703) | 63703..63777 | - | 75 | Protein_72 | conjugal transfer protein TrbE | - |
| LMH59_RS27425 (63809) | 63809..65764 | - | 1956 | WP_085845732.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LMH59_RS27430 (65823) | 65823..66461 | - | 639 | WP_069985712.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LMH59_RS27435 (66474) | 66474..67463 | - | 990 | WP_029497420.1 | conjugal transfer pilus assembly protein TraU | - |
| LMH59_RS27440 (67460) | 67460..67861 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| LMH59_RS27445 (67896) | 67896..68531 | - | 636 | WP_029497419.1 | type-F conjugative transfer system protein TraW | - |
| LMH59_RS27450 (68531) | 68531..68920 | - | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| LMH59_RS27455 (68920) | 68920..71559 | - | 2640 | WP_013214024.1 | type IV secretion system protein TraC | - |
| LMH59_RS27460 (71631) | 71631..72029 | - | 399 | WP_023179972.1 | hypothetical protein | - |
| LMH59_RS27465 (72408) | 72408..72812 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| LMH59_RS27470 (72879) | 72879..73190 | - | 312 | WP_094965623.1 | hypothetical protein | - |
| LMH59_RS27475 (73191) | 73191..73409 | - | 219 | WP_004195468.1 | hypothetical protein | - |
| LMH59_RS27480 (73732) | 73732..74316 | - | 585 | WP_032440547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LMH59_RS27485 (74389) | 74389..75813 | - | 1425 | WP_004194260.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LMH59_RS27490 (75813) | 75813..76553 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| LMH59_RS27495 (76540) | 76540..77106 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| LMH59_RS27500 (77126) | 77126..77431 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LMH59_RS27505 (77445) | 77445..77813 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LMH59_RS28375 (77882) | 77882..78082 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| LMH59_RS27510 (78168) | 78168..78869 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| LMH59_RS27515 (79099) | 79099..79491 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH59_RS27520 (79923) | 79923..80408 | + | 486 | WP_032440470.1 | hypothetical protein | VF |
| LMH59_RS27525 (80441) | 80441..80770 | - | 330 | WP_071994324.1 | DUF5983 family protein | - |
| LMH59_RS27530 (80803) | 80803..81624 | - | 822 | WP_023287138.1 | DUF932 domain-containing protein | - |
| LMH59_RS27535 (82454) | 82454..82867 | - | 414 | WP_069985713.1 | helix-turn-helix domain-containing protein | - |
| LMH59_RS27540 (82868) | 82868..83146 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| LMH59_RS27545 (83136) | 83136..83456 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMH59_RS27550 (83537) | 83537..83761 | - | 225 | WP_014343499.1 | hypothetical protein | - |
| LMH59_RS27555 (83772) | 83772..83984 | - | 213 | WP_019706020.1 | hypothetical protein | - |
| LMH59_RS27560 (84045) | 84045..84401 | - | 357 | WP_019706019.1 | hypothetical protein | - |
| LMH59_RS27565 (85033) | 85033..85383 | - | 351 | WP_023287104.1 | hypothetical protein | - |
| LMH59_RS27570 (85380) | 85380..85652 | - | 273 | WP_023287105.1 | hypothetical protein | - |
| LMH59_RS27575 (86346) | 86346..86444 | - | 99 | WP_159224797.1 | Hok/Gef family protein | - |
| LMH59_RS27580 (86419) | 86419..86475 | - | 57 | Protein_105 | modulator protein | - |
| LMH59_RS27585 (86574) | 86574..87647 | + | 1074 | WP_048270288.1 | IS481 family transposase ISKpn28 | Transposase |
| - (87647) | 87647..87771 | - | 125 | NuclAT_0 | - | - |
| - (87647) | 87647..87771 | - | 125 | NuclAT_0 | - | - |
| - (87647) | 87647..87771 | - | 125 | NuclAT_0 | - | - |
| - (87647) | 87647..87771 | - | 125 | NuclAT_0 | - | - |
| LMH59_RS27590 (87831) | 87831..88205 | - | 375 | WP_023287106.1 | hypothetical protein | - |
| LMH59_RS27595 (88261) | 88261..88587 | - | 327 | WP_001568059.1 | hypothetical protein | - |
| LMH59_RS27600 (88584) | 88584..89312 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| LMH59_RS27605 (89309) | 89309..89740 | - | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| LMH59_RS27610 (89785) | 89785..91842 | - | 2058 | WP_023287107.1 | ParB/RepB/Spo0J family partition protein | - |
| LMH59_RS27615 (91912) | 91912..92160 | - | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| LMH59_RS27620 (92209) | 92209..92751 | - | 543 | WP_015065513.1 | single-stranded DNA-binding protein | - |
| LMH59_RS27625 (93582) | 93582..94145 | - | 564 | WP_004152756.1 | methyltransferase | - |
| LMH59_RS27630 (94193) | 94193..95548 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| LMH59_RS27635 (95600) | 95600..95830 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| LMH59_RS27640 (95922) | 95922..96149 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| LMH59_RS27645 (96882) | 96882..97202 | - | 321 | WP_032436760.1 | hypothetical protein | - |
| LMH59_RS27650 (97237) | 97237..97491 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| LMH59_RS27655 (97679) | 97679..97870 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| LMH59_RS27660 (97913) | 97913..98419 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| LMH59_RS27665 (98462) | 98462..98890 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| LMH59_RS27670 (99571) | 99571..100338 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| LMH59_RS27675 (100392) | 100392..100811 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| LMH59_RS27680 (100821) | 100821..101042 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| LMH59_RS27685 (101042) | 101042..101743 | - | 702 | WP_001568041.1 | DNA methylase | - |
| LMH59_RS27690 (101815) | 101815..101984 | - | 170 | Protein_127 | hypothetical protein | - |
| LMH59_RS27695 (102180) | 102180..102410 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| LMH59_RS27700 (102473) | 102473..103144 | - | 672 | WP_013214012.1 | plasmid partitioning/stability family protein | - |
| LMH59_RS27705 (103147) | 103147..104118 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| LMH59_RS27710 (104352) | 104352..104783 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LMH59_RS27715 (104783) | 104783..106054 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|