MGE detailed information
MGE type: Genomic_island MGE length: 9187 bp
Accession: NZ_CP087392 Location: 4417495..4426681 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Accession: NZ_CP087392 Location: 4417495..4426681 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ86_RS19875 (LOZ86_19875) | 4412919..4413365 | - | 447 | WP_039482100.1 | helix-turn-helix domain-containing protein | - |
| LOZ86_RS19880 (LOZ86_19880) | 4413519..4414832 | + | 1314 | WP_225969787.1 | MFS transporter | - |
| LOZ86_RS19885 (LOZ86_19885) | 4414829..4416181 | + | 1353 | WP_039512786.1 | pyridoxal-dependent decarboxylase | - |
| LOZ86_RS19890 (LOZ86_19890) | 4416275..4416733 | - | 459 | WP_010286715.1 | hypothetical protein | - |
| LOZ86_RS19895 (LOZ86_19895) | 4417161..4417421 | + | 261 | WP_039482487.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LOZ86_RS19900 (LOZ86_19900) | 4417495..4417866 | + | 372 | WP_039482489.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS19905 (LOZ86_19905) | 4418025..4418441 | - | 417 | WP_039482106.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LOZ86_RS19910 (LOZ86_19910) | 4418438..4418749 | - | 312 | WP_039482109.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| LOZ86_RS19915 (LOZ86_19915) | 4419324..4419617 | - | 294 | WP_039482111.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
| LOZ86_RS19920 (LOZ86_19920) | 4419618..4420538 | - | 921 | WP_039482113.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
| LOZ86_RS19925 (LOZ86_19925) | 4420563..4421210 | - | 648 | WP_039482116.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| LOZ86_RS19930 (LOZ86_19930) | 4421210..4421944 | - | 735 | WP_111778762.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| LOZ86_RS19935 (LOZ86_19935) | 4421954..4423021 | - | 1068 | WP_039482121.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| LOZ86_RS19940 (LOZ86_19940) | 4423025..4423672 | - | 648 | WP_039482124.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| LOZ86_RS19945 (LOZ86_19945) | 4423665..4425227 | - | 1563 | WP_039482127.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| LOZ86_RS19950 (LOZ86_19950) | 4425842..4426204 | + | 363 | WP_039482128.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| LOZ86_RS19955 (LOZ86_19955) | 4426208..4426681 | + | 474 | WP_039482130.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LOZ86_RS19960 (LOZ86_19960) | 4426671..4429388 | - | 2718 | WP_052012030.1 | CRISPR-associated helicase/endonuclease Cas3 | - |
| LOZ86_RS19965 (LOZ86_19965) | 4429420..4429971 | - | 552 | WP_039482132.1 | polymer-forming cytoskeletal protein | - |
| LOZ86_RS19970 (LOZ86_19970) | 4430141..4430329 | - | 189 | WP_039482134.1 | hypothetical protein | - |
| LOZ86_RS19975 (LOZ86_19975) | 4430653..4431576 | + | 924 | WP_039482136.1 | aminoimidazole riboside kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|