MGE detailed information
MGE type: Prophage MGE length: 45286 bp
Accession: NZ_CP087392 Location: 3662970..3708255 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Accession: NZ_CP087392 Location: 3662970..3708255 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ86_RS16375 (LOZ86_16375) | 3658987..3659703 | + | 717 | WP_010306189.1 | two-component system response regulator BtsR | - |
| LOZ86_RS16380 (LOZ86_16380) | 3659750..3660100 | + | 351 | WP_039488078.1 | DUF2799 domain-containing protein | - |
| LOZ86_RS16385 (LOZ86_16385) | 3660161..3661369 | + | 1209 | WP_230242335.1 | IS256 family transposase | - |
| LOZ86_RS16390 (LOZ86_16390) | 3661683..3662621 | + | 939 | WP_039483930.1 | class I SAM-dependent methyltransferase | - |
| LOZ86_RS16395 (LOZ86_16395) | 3662970..3664028 | - | 1059 | WP_230242336.1 | IS91 family transposase ISCARN110 | Transposase |
| LOZ86_RS16400 (LOZ86_16400) | 3664124..3664459 | - | 336 | WP_230242338.1 | hypothetical protein | - |
| LOZ86_RS16405 (LOZ86_16405) | 3664662..3665564 | - | 903 | WP_230242340.1 | hypothetical protein | - |
| LOZ86_RS16410 (LOZ86_16410) | 3665578..3666435 | - | 858 | WP_230242342.1 | phage repressor protein CI | - |
| LOZ86_RS16415 (LOZ86_16415) | 3666558..3666893 | + | 336 | WP_230242344.1 | Cro/Cl family transcriptional regulator | - |
| LOZ86_RS16420 (LOZ86_16420) | 3666932..3667441 | + | 510 | WP_230242345.1 | phage regulatory CII family protein | - |
| LOZ86_RS16425 (LOZ86_16425) | 3667455..3667643 | + | 189 | WP_230242347.1 | hypothetical protein | - |
| LOZ86_RS16430 (LOZ86_16430) | 3667667..3667837 | - | 171 | WP_230242349.1 | hypothetical protein | - |
| LOZ86_RS16435 (LOZ86_16435) | 3667971..3668147 | + | 177 | WP_230242350.1 | hypothetical protein | - |
| LOZ86_RS16440 (LOZ86_16440) | 3668144..3668644 | + | 501 | WP_230242357.1 | replication protein B | - |
| LOZ86_RS16445 (LOZ86_16445) | 3668711..3668953 | + | 243 | WP_230242359.1 | DUF2732 family protein | - |
| LOZ86_RS16450 (LOZ86_16450) | 3668953..3669261 | + | 309 | WP_230242372.1 | DUF5405 family protein | - |
| LOZ86_RS16455 (LOZ86_16455) | 3669261..3669485 | + | 225 | WP_230243169.1 | TraR/DksA family transcriptional regulator | - |
| LOZ86_RS16460 (LOZ86_16460) | 3669673..3671976 | + | 2304 | WP_230242374.1 | replication endonuclease | - |
| LOZ86_RS16465 (LOZ86_16465) | 3671973..3672281 | + | 309 | WP_230242376.1 | hypothetical protein | - |
| LOZ86_RS16470 (LOZ86_16470) | 3672281..3672481 | + | 201 | WP_230242378.1 | hypothetical protein | - |
| LOZ86_RS16475 (LOZ86_16475) | 3673199..3673414 | + | 216 | WP_230242379.1 | hypothetical protein | - |
| LOZ86_RS16480 (LOZ86_16480) | 3673598..3674806 | - | 1209 | WP_230242335.1 | IS256 family transposase ISEc39 | Transposase |
| LOZ86_RS16485 (LOZ86_16485) | 3674892..3675605 | + | 714 | WP_230242381.1 | hypothetical protein | - |
| LOZ86_RS16490 (LOZ86_16490) | 3675911..3676204 | - | 294 | WP_230242397.1 | Arc family DNA-binding protein | - |
| LOZ86_RS16495 (LOZ86_16495) | 3676501..3677178 | + | 678 | WP_230242399.1 | ORF6N domain-containing protein | - |
| LOZ86_RS16500 (LOZ86_16500) | 3677265..3677519 | + | 255 | WP_116238280.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LOZ86_RS16505 (LOZ86_16505) | 3677516..3677857 | + | 342 | WP_039288288.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LOZ86_RS16510 (LOZ86_16510) | 3677890..3678909 | - | 1020 | WP_230242401.1 | phage portal protein | - |
| LOZ86_RS16515 (LOZ86_16515) | 3678906..3680675 | - | 1770 | WP_230242402.1 | terminase ATPase subunit family protein | - |
| LOZ86_RS16520 (LOZ86_16520) | 3680815..3681670 | + | 856 | Protein_3218 | GPO family capsid scaffolding protein | - |
| LOZ86_RS16525 (LOZ86_16525) | 3681721..3682848 | + | 1128 | WP_230242416.1 | phage major capsid protein, P2 family | - |
| LOZ86_RS16530 (LOZ86_16530) | 3682852..3683511 | + | 660 | WP_230242418.1 | terminase endonuclease subunit | - |
| LOZ86_RS16535 (LOZ86_16535) | 3683603..3684106 | + | 504 | WP_230242420.1 | head completion/stabilization protein | - |
| LOZ86_RS16540 (LOZ86_16540) | 3684106..3684309 | + | 204 | WP_230242422.1 | tail protein X | - |
| LOZ86_RS16545 (LOZ86_16545) | 3684300..3684521 | + | 222 | WP_033071244.1 | HP1 family phage holin | - |
| LOZ86_RS16550 (LOZ86_16550) | 3684505..3685014 | + | 510 | WP_230242423.1 | lysozyme | - |
| LOZ86_RS16555 (LOZ86_16555) | 3685011..3685370 | + | 360 | Protein_3225 | Rz-like lysis system protein LysB | - |
| LOZ86_RS16560 (LOZ86_16560) | 3685291..3685581 | + | 291 | WP_230242431.1 | Rz1-like lysis system protein LysC | - |
| LOZ86_RS16565 (LOZ86_16565) | 3685544..3685999 | + | 456 | WP_230242445.1 | phage tail protein | - |
| LOZ86_RS16570 (LOZ86_16570) | 3685992..3686441 | + | 450 | WP_230242447.1 | phage virion morphogenesis protein | - |
| LOZ86_RS16575 (LOZ86_16575) | 3686470..3686811 | - | 342 | WP_039512487.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LOZ86_RS16580 (LOZ86_16580) | 3686866..3687180 | - | 315 | WP_015841346.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOZ86_RS16585 (LOZ86_16585) | 3687525..3688190 | + | 666 | WP_039512486.1 | ORF6N domain-containing protein | - |
| LOZ86_RS16590 (LOZ86_16590) | 3688232..3689284 | - | 1053 | WP_230242448.1 | hypothetical protein | - |
| LOZ86_RS16595 (LOZ86_16595) | 3689387..3690022 | + | 636 | WP_230242450.1 | phage baseplate assembly protein V | - |
| LOZ86_RS16600 (LOZ86_16600) | 3690019..3690363 | + | 345 | WP_039512482.1 | GPW/gp25 family protein | - |
| LOZ86_RS16605 (LOZ86_16605) | 3690367..3691275 | + | 909 | WP_161546603.1 | baseplate assembly protein | - |
| LOZ86_RS16610 (LOZ86_16610) | 3691268..3691879 | + | 612 | WP_161546604.1 | phage tail protein I | - |
| LOZ86_RS16615 (LOZ86_16615) | 3691876..3694011 | + | 2136 | WP_230242457.1 | phage tail protein | - |
| LOZ86_RS16620 (LOZ86_16620) | 3694326..3695495 | + | 1170 | WP_230242459.1 | phage tail sheath protein | - |
| LOZ86_RS16625 (LOZ86_16625) | 3695510..3696031 | + | 522 | WP_039512476.1 | phage major tail tube protein | - |
| LOZ86_RS16630 (LOZ86_16630) | 3696099..3696395 | + | 297 | WP_230242461.1 | phage tail assembly protein | - |
| LOZ86_RS16635 (LOZ86_16635) | 3696410..3696532 | + | 123 | WP_010310409.1 | GpE family phage tail protein | - |
| LOZ86_RS16640 (LOZ86_16640) | 3696525..3699347 | + | 2823 | WP_230242463.1 | phage tail tape measure protein | - |
| LOZ86_RS16645 (LOZ86_16645) | 3699349..3699834 | + | 486 | WP_103161057.1 | phage tail protein | - |
| LOZ86_RS16650 (LOZ86_16650) | 3699831..3700991 | + | 1161 | WP_103199360.1 | phage late control D family protein | - |
| LOZ86_RS16655 (LOZ86_16655) | 3701079..3701297 | + | 219 | WP_103161059.1 | DNA-binding transcriptional regulator | - |
| LOZ86_RS16660 (LOZ86_16660) | 3701459..3701806 | - | 348 | WP_039483928.1 | 50S ribosomal protein L19 | - |
| LOZ86_RS16665 (LOZ86_16665) | 3701870..3702625 | - | 756 | WP_039483926.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| LOZ86_RS16670 (LOZ86_16670) | 3702664..3703212 | - | 549 | WP_039483924.1 | ribosome maturation factor RimM | - |
| LOZ86_RS16675 (LOZ86_16675) | 3703231..3703479 | - | 249 | WP_010285998.1 | 30S ribosomal protein S16 | - |
| LOZ86_RS16680 (LOZ86_16680) | 3703637..3704998 | - | 1362 | WP_039483922.1 | signal recognition particle protein | - |
| LOZ86_RS16685 (LOZ86_16685) | 3705169..3705963 | + | 795 | WP_039483921.1 | inner membrane protein YpjD | - |
| LOZ86_RS16690 (LOZ86_16690) | 3706033..3706548 | - | 516 | WP_014916315.1 | hypothetical protein | VF |
| LOZ86_RS16695 (LOZ86_16695) | 3706702..3708255 | - | 1554 | WP_039483919.1 | glutamate--cysteine ligase | - |
| LOZ86_RS16700 (LOZ86_16700) | 3708338..3708766 | - | 429 | WP_039483917.1 | YqaA family protein | - |
| LOZ86_RS16705 (LOZ86_16705) | 3708763..3709329 | - | 567 | WP_039514161.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| LOZ86_RS16730 (LOZ86_16730) | 3710477..3710662 | - | 186 | WP_005972168.1 | carbon storage regulator CsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|