MGE detailed information
MGE type: IScluster/Tn MGE length: 19097 bp
Accession: NZ_CP087291 Location: 54668..73764 Organism: Escherichia coli strain APEC 102026 Replicon: plasmid p102026_1
Accession: NZ_CP087291 Location: 54668..73764 Organism: Escherichia coli strain APEC 102026 Replicon: plasmid p102026_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO741_RS25895 (50111) | 50111..50461 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| LO741_RS25900 (51023) | 51023..51253 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LO741_RS25905 (51250) | 51250..51666 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LO741_RS25910 (51828) | 51828..53966 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| LO741_RS25915 (54324) | 54324..55495 | + | 1172 | WP_094284492.1 | IS91 family transposase ISSbo1 | Transposase |
| LO741_RS25920 (55658) | 55658..55897 | - | 240 | WP_001105068.1 | hypothetical protein | - |
| LO741_RS25925 (56003) | 56003..56278 | - | 276 | WP_000421266.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LO741_RS25930 (56278) | 56278..56562 | - | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LO741_RS25935 (57063) | 57063..57653 | + | 591 | WP_000086535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LO741_RS25940 (57700) | 57700..57858 | + | 159 | Protein_55 | integrase core domain-containing protein | - |
| LO741_RS25945 (58008) | 58008..59006 | + | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| LO741_RS25950 (59006) | 59006..60043 | + | 1038 | WP_000110580.1 | Hemin transport system permease protein HmuU | VF |
| LO741_RS25955 (60043) | 60043..60804 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| LO741_RS25960 (60861) | 60861..62048 | + | 1188 | WP_160348040.1 | MFS transporter | - |
| LO741_RS25965 (62141) | 62141..63334 | - | 1194 | Protein_60 | IS3 family transposase IS629 | Transposase |
| LO741_RS25970 (63481) | 63481..66978 | - | 3498 | WP_160348039.1 | Outer membrane protein IcsA autotransporter | VF |
| LO741_RS25975 (67243) | 67243..68473 | - | 1231 | Protein_62 | IS3 family transposase IS2 | Transposase |
| LO741_RS25980 (68499) | 68499..70035 | - | 1537 | Protein_63 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS25985 (70085) | 70085..70432 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS25990 (70429) | 70429..70809 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS25995 (71178) | 71178..72747 | - | 1570 | Protein_66 | IS66 family transposase | - |
| LO741_RS26000 (72767) | 72767..73060 | - | 294 | WP_274436188.1 | IS66 family transposase ISCro1 | Transposase |
| LO741_RS26005 (73131) | 73131..73794 | - | 664 | Protein_68 | IS66-like element accessory protein TnpA | - |
| LO741_RS26010 (74109) | 74109..74306 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| LO741_RS26015 (74303) | 74303..74587 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| LO741_RS26020 (74607) | 74607..75740 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| LO741_RS26025 (76280) | 76280..77518 | + | 1239 | WP_012006540.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| LO741_RS26030 (77502) | 77502..78329 | + | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|