MGE detailed information
MGE type: Genomic_island MGE length: 17510 bp
Accession: NZ_CP087170 Location: 3595243..3612752 Organism: Pseudomonas rhodesiae strain B21-046 Replicon: chromosome
Accession: NZ_CP087170 Location: 3595243..3612752 Organism: Pseudomonas rhodesiae strain B21-046 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY39_RS16070 (LOY39_16050) | 3591188..3593593 | - | 2406 | WP_258694808.1 | TonB-dependent receptor | - |
| LOY39_RS16075 (LOY39_16055) | 3594300..3594963 | + | 664 | Protein_3166 | site-specific integrase | - |
| LOY39_RS16080 (LOY39_16060) | 3595442..3596005 | - | 564 | WP_034099035.1 | hypothetical protein | - |
| LOY39_RS16085 (LOY39_16065) | 3595989..3597395 | - | 1407 | WP_034099037.1 | hypothetical protein | - |
| LOY39_RS16090 (LOY39_16070) | 3597392..3600343 | - | 2952 | WP_034099039.1 | hypothetical protein | - |
| LOY39_RS16095 (LOY39_16075) | 3600343..3601194 | - | 852 | WP_034099041.1 | hypothetical protein | - |
| LOY39_RS16100 (LOY39_16080) | 3601414..3601533 | + | 120 | Protein_3171 | IS5 family transposase ISPal1 | Transposase |
| LOY39_RS16105 (LOY39_16085) | 3601618..3601854 | - | 237 | WP_034099043.1 | YdaS family helix-turn-helix protein | - |
| LOY39_RS16110 (LOY39_16090) | 3601953..3602378 | + | 426 | WP_005789662.1 | helix-turn-helix domain-containing protein | - |
| LOY39_RS16115 (LOY39_16095) | 3602430..3602747 | - | 318 | WP_258694809.1 | transcriptional regulator | Antitoxin Detail |
| LOY39_RS16120 (LOY39_16100) | 3602744..3603088 | - | 345 | WP_034099048.1 | toxin | Toxin Detail |
| LOY39_RS16125 (LOY39_16105) | 3603211..3604014 | - | 804 | WP_034099050.1 | phage antirepressor KilAC domain-containing protein | - |
| LOY39_RS16130 (LOY39_16110) | 3604011..3604322 | - | 312 | WP_258694810.1 | DUF3077 domain-containing protein | - |
| LOY39_RS16135 (LOY39_16115) | 3604396..3604551 | - | 156 | WP_258694811.1 | Arc family DNA-binding protein | - |
| LOY39_RS16140 (LOY39_16120) | 3604696..3605082 | + | 387 | WP_258694812.1 | helix-turn-helix transcriptional regulator | - |
| LOY39_RS16145 (LOY39_16125) | 3605332..3606249 | - | 918 | WP_258694813.1 | hypothetical protein | - |
| LOY39_RS16150 (LOY39_16130) | 3606450..3606923 | + | 474 | WP_034099054.1 | hypothetical protein | - |
| LOY39_RS16155 (LOY39_16135) | 3607029..3607316 | + | 288 | WP_034099056.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LOY39_RS16160 (LOY39_16140) | 3607306..3607593 | + | 288 | WP_034099058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOY39_RS16165 (LOY39_16145) | 3607633..3608397 | - | 765 | WP_034099060.1 | KilA-N domain-containing protein | - |
| LOY39_RS16170 (LOY39_16150) | 3608510..3608728 | - | 219 | WP_034099062.1 | hypothetical protein | - |
| LOY39_RS16175 (LOY39_16155) | 3608751..3609059 | - | 309 | WP_034114377.1 | hypothetical protein | - |
| LOY39_RS16180 (LOY39_16160) | 3609137..3609347 | - | 211 | Protein_3187 | hypothetical protein | - |
| LOY39_RS16185 (LOY39_16165) | 3610174..3610407 | + | 234 | WP_258694814.1 | Arc family DNA-binding protein | - |
| LOY39_RS16190 (LOY39_16170) | 3610559..3610906 | + | 348 | WP_258694815.1 | hypothetical protein | - |
| LOY39_RS16195 (LOY39_16175) | 3610995..3611315 | + | 321 | WP_232925112.1 | hypothetical protein | - |
| LOY39_RS16200 (LOY39_16180) | 3611201..3612382 | + | 1182 | WP_258695808.1 | hypothetical protein ; Integrase | Integrase |
| LOY39_RS16205 (LOY39_16185) | 3612749..3613858 | - | 1110 | WP_034099071.1 | MFS transporter | - |
| LOY39_RS16210 (LOY39_16190) | 3614004..3614927 | - | 924 | WP_034099072.1 | LysR substrate-binding domain-containing protein | - |
| LOY39_RS16215 (LOY39_16195) | 3615433..3616809 | + | 1377 | WP_034099074.1 | MFS family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|