MGE detailed information
MGE type: Mobilizable plasmid MGE length: 61140 bp
Accession: NZ_CP086608 Location: 1..61140 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-4
Accession: NZ_CP086608 Location: 1..61140 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN29_RS24580 (LNN29_24530) | 1..1029 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| LNN29_RS24585 (LNN29_24535) | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| LNN29_RS24590 (LNN29_24540) | 2570..2722 | + | 153 | Protein_2 | DUF5431 family protein | - |
| LNN29_RS24595 (LNN29_24545) | 2667..2789 | + | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| LNN29_RS24600 (LNN29_24550) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| LNN29_RS24605 (LNN29_24555) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| LNN29_RS24610 (LNN29_24560) | 3911..4576 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| LNN29_RS24615 (LNN29_24565) | 4800..5033 | + | 234 | WP_057520283.1 | hypothetical protein | - |
| LNN29_RS24620 (LNN29_24570) | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| LNN29_RS24625 (LNN29_24575) | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| LNN29_RS24630 (LNN29_24580) | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| LNN29_RS24635 (LNN29_24585) | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| LNN29_RS24640 (LNN29_24590) | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| LNN29_RS24645 (LNN29_24595) | 7767..7985 | + | 219 | WP_154101533.1 | hypothetical protein | - |
| LNN29_RS24650 (LNN29_24600) | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| LNN29_RS24655 (LNN29_24605) | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LNN29_RS24660 (LNN29_24610) | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LNN29_RS24665 (LNN29_24615) | 9579..10022 | - | 444 | WP_023223351.1 | hypothetical protein | - |
| LNN29_RS24670 (LNN29_24620) | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN29_RS24675 (LNN29_24625) | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| LNN29_RS24680 (LNN29_24630) | 11150..11473 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| LNN29_RS24685 (LNN29_24635) | 11450..11590 | - | 141 | Protein_21 | hypothetical protein | - |
| LNN29_RS24690 (LNN29_24640) | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| LNN29_RS24695 (LNN29_24645) | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| LNN29_RS24700 (LNN29_24650) | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| LNN29_RS24705 (LNN29_24655) | 13858..14199 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| LNN29_RS24710 (LNN29_24660) | 14196..18509 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| LNN29_RS24715 (LNN29_24665) | 18730..20355 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| LNN29_RS24720 (LNN29_24670) | 20427..21200 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| LNN29_RS24725 (LNN29_24675) | 21159..21599 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| LNN29_RS24730 (LNN29_24680) | 21945..22151 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| LNN29_RS24735 (LNN29_24685) | 22220..24385 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| LNN29_RS24740 (LNN29_24690) | 24390..24965 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| LNN29_RS24745 (LNN29_24695) | 25135..26811 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| LNN29_RS24750 (LNN29_24700) | 26906..27438 | - | 533 | Protein_34 | thermonuclease family protein | - |
| LNN29_RS24755 (LNN29_24705) | 27468..28121 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| LNN29_RS24760 (LNN29_24710) | 28133..29257 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| LNN29_RS24765 (LNN29_24715) | 30221..30418 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| LNN29_RS24770 (LNN29_24720) | 31240..32439 | - | 1200 | Protein_38 | hypothetical protein | VF |
| LNN29_RS24775 (LNN29_24725) | 32452..33087 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LNN29_RS24780 (LNN29_24730) | 33091..33573 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| LNN29_RS24785 (LNN29_24735) | 33639..34202 | - | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| LNN29_RS24790 (LNN29_24740) | 34252..35361 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LNN29_RS24795 (LNN29_24745) | 35352..36890 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| LNN29_RS24800 (LNN29_24750) | 36915..37409 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| LNN29_RS24805 (LNN29_24755) | 37393..38703 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| LNN29_RS24810 (LNN29_24760) | 38754..40397 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| LNN29_RS24815 (LNN29_24765) | 40390..40926 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| LNN29_RS24820 (LNN29_24770) | 40973..42931 | - | 1959 | WP_229321795.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LNN29_RS24825 (LNN29_24775) | 42947..44002 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| LNN29_RS24830 (LNN29_24780) | 44021..45160 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| LNN29_RS24835 (LNN29_24785) | 45150..45920 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| LNN29_RS24840 (LNN29_24790) | 45917..46651 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| LNN29_RS24845 (LNN29_24795) | 46817..49174 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| LNN29_RS24850 (LNN29_24800) | 49180..49500 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| LNN29_RS24855 (LNN29_24805) | 49571..49861 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| LNN29_RS24860 (LNN29_24810) | 49861..50445 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| LNN29_RS24865 (LNN29_24815) | 50466..50864 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| LNN29_RS24870 (LNN29_24820) | 50983..51420 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| LNN29_RS24875 (LNN29_24825) | 51426..52661 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| LNN29_RS24880 (LNN29_24830) | 52664..52963 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN29_RS24885 (LNN29_24835) | 53011..53820 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| LNN29_RS24890 (LNN29_24840) | 54043..54267 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| LNN29_RS24895 (LNN29_24845) | 54276..54920 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| LNN29_RS24900 (LNN29_24850) | 54926..55921 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| LNN29_RS24905 (LNN29_24855) | 55925..56182 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| LNN29_RS24910 (LNN29_24860) | 56179..56481 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| LNN29_RS24915 (LNN29_24865) | 56462..56719 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| LNN29_RS24920 (LNN29_24870) | 56752..57198 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| LNN29_RS24925 (LNN29_24875) | 57209..57379 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| LNN29_RS24930 (LNN29_24880) | 57383..57826 | - | 444 | WP_229321796.1 | NfeD family protein | - |
| LNN29_RS24935 (LNN29_24885) | 58200..59153 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| LNN29_RS24940 (LNN29_24890) | 59180..59356 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| LNN29_RS24945 (LNN29_24895) | 59349..59564 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| LNN29_RS24950 (LNN29_24900) | 59557..60009 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|