MGE detailed information
MGE type: Mobilizable plasmid MGE length: 61289 bp
Accession: NZ_CP086515 Location: 1..61289 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_5
Accession: NZ_CP086515 Location: 1..61289 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS25525 (LNN50_25530) | 1..1029 | + | 1029 | WP_001175211.1 | plasmid replication initiator RepA | - |
| LNN50_RS25530 (LNN50_25535) | 2412..3781 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| LNN50_RS25535 (LNN50_25540) | 3826..3978 | + | 153 | WP_001414491.1 | DUF5431 family protein | - |
| LNN50_RS25540 (LNN50_25545) | 3923..4045 | + | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| LNN50_RS25545 (LNN50_25550) | 4195..4791 | + | 597 | WP_000125166.1 | ProQ/FINO family protein | - |
| LNN50_RS25550 (LNN50_25555) | 4809..5093 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| LNN50_RS25555 (LNN50_25560) | 5172..5837 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| LNN50_RS25560 (LNN50_25565) | 6435..6764 | + | 330 | WP_000855118.1 | hypothetical protein | - |
| LNN50_RS25565 (LNN50_25570) | 7345..7668 | + | 324 | WP_000427402.1 | hypothetical protein | - |
| LNN50_RS25570 (LNN50_25575) | 7710..7919 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| LNN50_RS25575 (LNN50_25580) | 8017..8241 | + | 225 | WP_000814384.1 | hypothetical protein | - |
| LNN50_RS25580 (LNN50_25585) | 8292..8552 | + | 261 | WP_000702246.1 | hypothetical protein | Toxin Detail |
| LNN50_RS25585 (LNN50_25590) | 8542..8793 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| LNN50_RS25590 (LNN50_25595) | 9343..9567 | + | 225 | WP_000814384.1 | hypothetical protein | - |
| LNN50_RS25595 (LNN50_25600) | 9618..9878 | + | 261 | WP_000702246.1 | hypothetical protein | Toxin Detail |
| LNN50_RS25600 (LNN50_25605) | 9868..10119 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| LNN50_RS25605 (LNN50_25610) | 10669..10947 | + | 279 | WP_000545937.1 | hypothetical protein | - |
| LNN50_RS25610 (LNN50_25615) | 11367..11633 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN50_RS25615 (LNN50_25620) | 11740..12159 | - | 420 | WP_242879860.1 | hypothetical protein | - |
| LNN50_RS25620 (LNN50_25625) | 12456..12638 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| LNN50_RS25625 (LNN50_25630) | 12663..13100 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN50_RS25630 (LNN50_25635) | 13231..13557 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| LNN50_RS25635 (LNN50_25640) | 13577..14176 | - | 600 | WP_000091422.1 | hypothetical protein | - |
| LNN50_RS25640 (LNN50_25645) | 14223..14924 | - | 702 | WP_000280995.1 | StbB family protein | - |
| LNN50_RS25645 (LNN50_25650) | 14930..15409 | - | 480 | WP_001058980.1 | hypothetical protein | - |
| LNN50_RS25650 (LNN50_25655) | 15739..16080 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| LNN50_RS25655 (LNN50_25660) | 16077..20264 | + | 4188 | WP_000637168.1 | hypothetical protein | - |
| LNN50_RS25660 (LNN50_25665) | 20307..20747 | - | 441 | WP_000666081.1 | hypothetical protein | - |
| LNN50_RS25665 (LNN50_25670) | 21319..21525 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| LNN50_RS25670 (LNN50_25675) | 21644..21964 | - | 321 | WP_000668719.1 | hypothetical protein | - |
| LNN50_RS25675 (LNN50_25680) | 21989..22411 | - | 423 | WP_000939694.1 | hypothetical protein | - |
| LNN50_RS25680 (LNN50_25685) | 22445..24601 | - | 2157 | WP_000765170.1 | type IA DNA topoisomerase | - |
| LNN50_RS25685 (LNN50_25690) | 24606..25181 | - | 576 | WP_001198964.1 | hypothetical protein | - |
| LNN50_RS25690 (LNN50_25695) | 25206..25793 | - | 588 | WP_000280685.1 | DUF6012 family protein | - |
| LNN50_RS25695 (LNN50_25700) | 25819..26148 | - | 330 | WP_001414501.1 | hypothetical protein | - |
| LNN50_RS25700 (LNN50_25705) | 26475..26879 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| LNN50_RS25705 (LNN50_25710) | 26895..27430 | - | 536 | Protein_36 | thermonuclease family protein | - |
| LNN50_RS25710 (LNN50_25715) | 27460..28113 | - | 654 | WP_000572550.1 | hypothetical protein | - |
| LNN50_RS25715 (LNN50_25720) | 28125..29249 | - | 1125 | WP_000486720.1 | site-specific integrase | - |
| LNN50_RS25720 (LNN50_25725) | 30750..32033 | - | 1284 | WP_048238078.1 | hypothetical protein | VF |
| LNN50_RS25725 (LNN50_25730) | 32046..32681 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LNN50_RS25730 (LNN50_25735) | 32685..33167 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| LNN50_RS25735 (LNN50_25740) | 33234..33791 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| LNN50_RS25740 (LNN50_25745) | 33836..34945 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LNN50_RS25745 (LNN50_25750) | 34936..36474 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| LNN50_RS25750 (LNN50_25755) | 36499..36993 | - | 495 | WP_000912554.1 | hypothetical protein | VF |
| LNN50_RS25755 (LNN50_25760) | 36977..38287 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| LNN50_RS25760 (LNN50_25765) | 38338..39981 | - | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| LNN50_RS25765 (LNN50_25770) | 40032..41990 | - | 1959 | WP_000338972.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LNN50_RS25770 (LNN50_25775) | 42006..43061 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| LNN50_RS25775 (LNN50_25780) | 43104..44243 | - | 1140 | WP_000790639.1 | Type IV secretion system protein virB10 | VF |
| LNN50_RS25780 (LNN50_25785) | 44233..45003 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| LNN50_RS25785 (LNN50_25790) | 45000..45734 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| LNN50_RS25790 (LNN50_25795) | 45900..48257 | - | 2358 | WP_000548951.1 | VirB4 family type IV secretion system protein | - |
| LNN50_RS25795 (LNN50_25800) | 48263..48583 | - | 321 | WP_000362083.1 | VirB3 family type IV secretion system protein | - |
| LNN50_RS25800 (LNN50_25805) | 48654..48944 | - | 291 | WP_000865478.1 | hypothetical protein | - |
| LNN50_RS25805 (LNN50_25810) | 48944..49528 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| LNN50_RS25810 (LNN50_25815) | 49549..49947 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| LNN50_RS25815 (LNN50_25820) | 50066..50503 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| LNN50_RS25820 (LNN50_25825) | 50509..51744 | - | 1236 | WP_000733393.1 | hypothetical protein | VF |
| LNN50_RS25825 (LNN50_25830) | 51747..52034 | - | 288 | WP_001326593.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN50_RS25830 (LNN50_25835) | 52206..52841 | - | 636 | WP_000835769.1 | hypothetical protein | - |
| LNN50_RS25835 (LNN50_25840) | 52889..53698 | + | 810 | WP_001005154.1 | DUF5710 domain-containing protein | - |
| LNN50_RS25840 (LNN50_25845) | 53751..54005 | - | 255 | WP_000609210.1 | EexN family lipoprotein | - |
| LNN50_RS25845 (LNN50_25850) | 54008..54649 | - | 642 | WP_001415805.1 | hypothetical protein | VF |
| LNN50_RS25850 (LNN50_25855) | 54655..55650 | - | 996 | WP_000276068.1 | type IV secretion system protein | - |
| LNN50_RS25855 (LNN50_25860) | 55654..55911 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| LNN50_RS25860 (LNN50_25865) | 55908..56210 | - | 303 | WP_000189499.1 | hypothetical protein | - |
| LNN50_RS25865 (LNN50_25870) | 56424..57017 | - | 594 | WP_001243171.1 | hypothetical protein | - |
| LNN50_RS25870 (LNN50_25875) | 57168..57830 | - | 663 | WP_001243159.1 | hypothetical protein | - |
| LNN50_RS25875 (LNN50_25880) | 57841..58011 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| LNN50_RS25880 (LNN50_25885) | 58015..58458 | - | 444 | WP_000498521.1 | NfeD family protein | - |
| LNN50_RS25885 (LNN50_25890) | 58520..59473 | - | 954 | WP_072097371.1 | SPFH domain-containing protein | - |
| LNN50_RS25890 (LNN50_25895) | 59519..59713 | - | 195 | WP_001127358.1 | DUF1187 family protein | - |
| LNN50_RS25895 (LNN50_25900) | 59706..60158 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|