MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90446 bp
Accession: NZ_CP086513 Location: 1..90446 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_3
Accession: NZ_CP086513 Location: 1..90446 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS24520 (LNN50_24525) | 760..5340 | + | 4581 | WP_242879858.1 | transglycosylase | - |
| LNN50_RS24525 (LNN50_24530) | 5346..5720 | + | 375 | WP_032220997.1 | hypothetical protein | - |
| LNN50_RS24530 (LNN50_24535) | 5717..7147 | + | 1431 | WP_063074755.1 | hypothetical protein | - |
| LNN50_RS24535 (LNN50_24540) | 7158..8003 | + | 846 | WP_063074754.1 | hypothetical protein | - |
| LNN50_RS24540 (LNN50_24545) | 8098..8544 | + | 447 | WP_032220795.1 | hypothetical protein | - |
| LNN50_RS24545 (LNN50_24550) | 8547..10229 | + | 1683 | WP_168420631.1 | tail fiber protein | - |
| LNN50_RS24550 (LNN50_24555) | 10232..10648 | + | 417 | WP_097415175.1 | tail fiber assembly protein | - |
| LNN50_RS24555 (LNN50_24560) | 10620..11222 | - | 603 | WP_063074797.1 | tail fiber assembly protein | - |
| LNN50_RS24560 (LNN50_24565) | 11222..11650 | - | 429 | WP_024174668.1 | phage tail protein | - |
| LNN50_RS24565 (LNN50_24570) | 11691..12119 | - | 429 | WP_074152847.1 | phage tail protein | - |
| LNN50_RS24570 (LNN50_24575) | 12191..12763 | + | 573 | WP_001165547.1 | recombinase family protein | - |
| LNN50_RS24575 (LNN50_24580) | 12959..13196 | - | 238 | Protein_12 | recombinase family protein | - |
| LNN50_RS24580 (LNN50_24585) | 13300..13626 | + | 327 | WP_000457140.1 | holin | - |
| LNN50_RS24585 (LNN50_24590) | 13626..14072 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| LNN50_RS24590 (LNN50_24595) | 14062..14682 | + | 621 | WP_000066534.1 | hypothetical protein | - |
| LNN50_RS24595 (LNN50_24600) | 14675..16612 | + | 1938 | WP_063074798.1 | hypothetical protein | - |
| LNN50_RS24600 (LNN50_24605) | 16612..16980 | + | 369 | WP_000156174.1 | hypothetical protein | - |
| LNN50_RS24605 (LNN50_24610) | 17075..18460 | + | 1386 | WP_102218736.1 | hypothetical protein | - |
| LNN50_RS24610 (LNN50_24615) | 18525..20207 | + | 1683 | WP_000201469.1 | portal protein | - |
| LNN50_RS24615 (LNN50_24620) | 20221..21219 | + | 999 | WP_074417224.1 | head processing protein | - |
| LNN50_RS24620 (LNN50_24625) | 21420..22382 | + | 963 | WP_168420629.1 | lytic replication protein | - |
| LNN50_RS24625 (LNN50_24630) | 22797..23021 | + | 225 | WP_001436278.1 | host cell division inhibitor Icd-like protein | - |
| LNN50_RS24630 (LNN50_24635) | 23021..23728 | + | 708 | WP_053919845.1 | Rha family transcriptional regulator | - |
| LNN50_RS24635 (LNN50_24640) | 23728..23925 | + | 198 | WP_047648389.1 | hypothetical protein | - |
| LNN50_RS24640 (LNN50_24645) | 23958..24443 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| LNN50_RS24645 (LNN50_24650) | 24595..31431 | + | 6837 | WP_168420627.1 | SNF2-related protein | - |
| LNN50_RS24650 (LNN50_24655) | 31468..31902 | + | 435 | WP_163419474.1 | olxA | - |
| LNN50_RS24655 (LNN50_24660) | 31905..32165 | + | 261 | WP_069067271.1 | hypothetical protein | - |
| LNN50_RS24660 | 32488..32796 | + | 309 | WP_001350898.1 | VRR-NUC domain-containing protein | - |
| LNN50_RS24665 (LNN50_24670) | 32811..33011 | + | 201 | WP_001238268.1 | hypothetical protein | - |
| LNN50_RS24670 (LNN50_24675) | 33406..34629 | + | 1224 | WP_236469954.1 | DivIVA domain-containing protein | - |
| LNN50_RS24690 (LNN50_24695) | 37203..38030 | + | 828 | WP_032220960.1 | SPFH domain-containing protein | - |
| LNN50_RS24700 (LNN50_24705) | 38714..39289 | + | 576 | WP_175421541.1 | hypothetical protein | - |
| LNN50_RS24705 (LNN50_24710) | 39496..39681 | + | 186 | WP_001130998.1 | hypothetical protein | - |
| LNN50_RS24710 (LNN50_24715) | 39790..40182 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| LNN50_RS24715 (LNN50_24720) | 40179..41543 | + | 1365 | WP_000060660.1 | hypothetical protein | - |
| LNN50_RS24720 (LNN50_24725) | 41543..43051 | + | 1509 | WP_000897063.1 | hypothetical protein | - |
| LNN50_RS24725 (LNN50_24730) | 43079..44116 | - | 1038 | WP_023908617.1 | hypothetical protein | - |
| LNN50_RS24730 (LNN50_24735) | 44511..45539 | + | 1029 | WP_168420624.1 | tyrosine-type recombinase/integrase | - |
| LNN50_RS24735 (LNN50_24740) | 45613..45957 | + | 345 | WP_001191776.1 | hypothetical protein | - |
| LNN50_RS24740 (LNN50_24745) | 45954..46430 | + | 477 | WP_000861174.1 | hypothetical protein | - |
| LNN50_RS24745 (LNN50_24750) | 46427..46921 | + | 495 | WP_000640906.1 | dUTP diphosphatase | - |
| LNN50_RS24750 (LNN50_24755) | 46936..47598 | + | 663 | WP_168420622.1 | DUF2829 domain-containing protein | - |
| LNN50_RS24755 (LNN50_24760) | 47605..48405 | + | 801 | WP_168420620.1 | hypothetical protein | - |
| LNN50_RS24760 (LNN50_24765) | 48489..48869 | - | 381 | WP_168420618.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LNN50_RS24765 (LNN50_24770) | 48869..49090 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LNN50_RS24770 (LNN50_24775) | 49163..49552 | - | 390 | WP_168420616.1 | S24 family peptidase | - |
| LNN50_RS24775 (LNN50_24780) | 49676..49927 | - | 252 | WP_063074807.1 | DNA polymerase III subunit theta | - |
| LNN50_RS24780 (LNN50_24785) | 50242..51000 | - | 759 | WP_072756859.1 | hypothetical protein | - |
| LNN50_RS24785 (LNN50_24790) | 50997..51206 | - | 210 | WP_075660655.1 | hypothetical protein | - |
| LNN50_RS24790 (LNN50_24795) | 51286..51462 | - | 177 | WP_157902266.1 | hypothetical protein | - |
| LNN50_RS24795 (LNN50_24800) | 51462..51755 | - | 294 | WP_075660654.1 | hypothetical protein | - |
| LNN50_RS24800 (LNN50_24805) | 51768..52172 | - | 405 | WP_080077662.1 | hypothetical protein | - |
| LNN50_RS24805 (LNN50_24810) | 52165..52446 | - | 282 | WP_102218741.1 | ASCH domain-containing protein | - |
| LNN50_RS24810 (LNN50_24815) | 52439..52630 | - | 192 | WP_242806062.1 | DUF551 domain-containing protein | - |
| LNN50_RS24815 (LNN50_24820) | 53141..53266 | - | 126 | Protein_56 | DUF551 domain-containing protein | - |
| LNN50_RS24820 (LNN50_24825) | 53263..53472 | - | 210 | WP_000951710.1 | hypothetical protein | - |
| LNN50_RS24825 (LNN50_24830) | 53474..53668 | - | 195 | WP_000224731.1 | hypothetical protein | - |
| LNN50_RS24830 (LNN50_24835) | 53670..54356 | - | 687 | WP_097290468.1 | ead/Ea22-like family protein | - |
| LNN50_RS24835 (LNN50_24840) | 54353..54940 | - | 588 | WP_047647124.1 | ead/Ea22-like family protein | - |
| LNN50_RS24840 (LNN50_24845) | 54927..55225 | - | 299 | Protein_61 | hypothetical protein | - |
| LNN50_RS24845 (LNN50_24850) | 55239..56192 | - | 954 | WP_224173527.1 | DUF968 domain-containing protein | - |
| LNN50_RS24850 (LNN50_24855) | 56332..57024 | - | 693 | WP_000613619.1 | metallophosphoesterase | - |
| LNN50_RS24855 (LNN50_24860) | 57021..57332 | - | 312 | WP_000022451.1 | hypothetical protein | - |
| LNN50_RS24860 (LNN50_24865) | 57329..57553 | - | 225 | WP_048256676.1 | hypothetical protein | - |
| LNN50_RS24865 (LNN50_24870) | 57550..57825 | - | 276 | WP_058799016.1 | DUF4752 family protein | - |
| LNN50_RS24870 (LNN50_24875) | 57822..58256 | - | 435 | WP_113406458.1 | hypothetical protein | - |
| LNN50_RS24875 (LNN50_24880) | 58246..58530 | - | 285 | WP_052936027.1 | DNA-binding protein | - |
| LNN50_RS24880 (LNN50_24885) | 58560..59171 | - | 612 | WP_183022158.1 | DUF4406 domain-containing protein | - |
| LNN50_RS24885 (LNN50_24890) | 59444..60022 | + | 579 | WP_023908602.1 | Ref family recombination enhancement nuclease | - |
| LNN50_RS24890 (LNN50_24895) | 60354..60521 | + | 168 | WP_168420614.1 | hypothetical protein | - |
| LNN50_RS24895 (LNN50_24900) | 60697..60816 | + | 120 | WP_071526433.1 | ash family protein | - |
| LNN50_RS24900 (LNN50_24905) | 60835..61050 | + | 216 | WP_000201263.1 | host cell division inhibitor Icd-like protein | - |
| LNN50_RS24905 (LNN50_24910) | 61050..61976 | + | 927 | WP_001054016.1 | Rha family transcriptional regulator | - |
| LNN50_RS24910 (LNN50_24915) | 62036..62320 | + | 285 | WP_000717719.1 | hypothetical protein | - |
| LNN50_RS24915 (LNN50_24920) | 62457..62816 | + | 360 | WP_157704636.1 | hypothetical protein | - |
| LNN50_RS24920 (LNN50_24925) | 62856..63677 | - | 822 | WP_001427910.1 | hypothetical protein | - |
| LNN50_RS24925 (LNN50_24930) | 64023..64676 | + | 654 | WP_000410952.1 | hypothetical protein | - |
| LNN50_RS24930 (LNN50_24935) | 65005..65334 | + | 330 | WP_000542383.1 | hypothetical protein | - |
| LNN50_RS24935 (LNN50_24940) | 65327..66520 | + | 1194 | WP_102218742.1 | phage tail protein | - |
| LNN50_RS24940 (LNN50_24945) | 66554..67282 | - | 729 | WP_000986754.1 | hypothetical protein | - |
| LNN50_RS24945 (LNN50_24950) | 67319..67504 | - | 186 | Protein_82 | hypothetical protein | - |
| LNN50_RS24950 (LNN50_24955) | 67561..67899 | - | 339 | WP_000806445.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LNN50_RS24955 (LNN50_24960) | 67970..68272 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNN50_RS24960 (LNN50_24965) | 68435..69226 | + | 792 | WP_000532305.1 | hypothetical protein | - |
| LNN50_RS24965 (LNN50_24970) | 69223..69990 | + | 768 | WP_000203290.1 | hypothetical protein | - |
| LNN50_RS24970 (LNN50_24975) | 69994..70974 | + | 981 | WP_000046499.1 | hypothetical protein | - |
| LNN50_RS24975 (LNN50_24980) | 70971..71624 | + | 654 | WP_000828873.1 | hypothetical protein | - |
| LNN50_RS24980 (LNN50_24985) | 71684..72589 | + | 906 | WP_001258014.1 | recombination-associated protein RdgC | - |
| LNN50_RS24985 (LNN50_24990) | 72603..73253 | + | 651 | WP_032153356.1 | hypothetical protein | - |
| LNN50_RS24990 (LNN50_24995) | 73333..74151 | + | 819 | Protein_91 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LNN50_RS24995 (LNN50_25000) | 74200..75861 | - | 1662 | WP_001287146.1 | glutamine--tRNA ligase | - |
| LNN50_RS25000 (LNN50_25005) | 76130..76417 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| LNN50_RS25005 (LNN50_25010) | 76410..77051 | - | 642 | WP_016262372.1 | AAA family ATPase | - |
| LNN50_RS25010 (LNN50_25015) | 77339..77677 | - | 339 | WP_102218733.1 | plasmid partitioning/stability family protein | - |
| LNN50_RS25015 (LNN50_25020) | 77691..78647 | - | 957 | WP_001557707.1 | plasmid segregation protein ParM | - |
| LNN50_RS25020 (LNN50_25025) | 78915..79199 | + | 285 | WP_121272465.1 | PAAR domain-containing protein | - |
| LNN50_RS25025 (LNN50_25030) | 79199..80002 | + | 804 | WP_005031630.1 | hypothetical protein | - |
| LNN50_RS25030 (LNN50_25035) | 80073..80531 | + | 459 | WP_000243176.1 | hypothetical protein | - |
| LNN50_RS25035 (LNN50_25040) | 80685..81143 | - | 459 | WP_000020026.1 | hypothetical protein | - |
| LNN50_RS25040 (LNN50_25045) | 81160..81552 | - | 393 | WP_224173540.1 | hypothetical protein | - |
| LNN50_RS25045 (LNN50_25050) | 81711..83408 | + | 1698 | WP_137441744.1 | capsid protein | - |
| LNN50_RS25050 (LNN50_25055) | 83555..83833 | + | 279 | WP_024259817.1 | Ig-like domain-containing protein | - |
| LNN50_RS25055 (LNN50_25060) | 83901..85559 | + | 1659 | WP_001033849.1 | tail sheath protein | - |
| LNN50_RS25060 (LNN50_25065) | 85603..86337 | + | 735 | WP_000801019.1 | hypothetical protein | - |
| LNN50_RS25065 (LNN50_25070) | 86429..86977 | + | 549 | WP_000870304.1 | hypothetical protein | - |
| LNN50_RS25070 (LNN50_25075) | 86986..87477 | + | 492 | WP_032220995.1 | hypothetical protein | - |
| LNN50_RS25075 (LNN50_25080) | 87530..88081 | + | 552 | WP_032220996.1 | hypothetical protein | - |
| LNN50_RS25080 (LNN50_25085) | 88097..88804 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| LNN50_RS25085 (LNN50_25090) | 89186..89941 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|