MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP086500 Location: 2546628..2547776 Organism: Escherichia coli strain Ec-050-T5-MAC Replicon: chromosome
Accession: NZ_CP086500 Location: 2546628..2547776 Organism: Escherichia coli strain Ec-050-T5-MAC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN49_RS12170 (2542031) | 2542031..2542207 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LNN49_RS12175 (2542429) | 2542429..2542659 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LNN49_RS12180 (2542751) | 2542751..2544712 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LNN49_RS12185 (2544785) | 2544785..2545321 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LNN49_RS12190 (2545413) | 2545413..2546588 | + | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| LNN49_RS12195 (2546628) | 2546628..2547836 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| LNN49_RS12200 (2547844) | 2547844..2548269 | + | 426 | Protein_2403 | IS200/IS605 family transposase | - |
| LNN49_RS12205 (2548368) | 2548368..2549036 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LNN49_RS12210 (2549338) | 2549338..2549931 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LNN49_RS12215 (2549928) | 2549928..2550920 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LNN49_RS12220 (2551044) | 2551044..2552024 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| LNN49_RS12225 (2552016) | 2552016..2552555 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |