MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89996 bp
Accession: NZ_CP086493 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T5-ESBL Replicon: plasmid pEc-050-T5-ESBL_3
Accession: NZ_CP086493 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T5-ESBL Replicon: plasmid pEc-050-T5-ESBL_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN51_RS24520 (LNN51_24525) | 2208..2693 | + | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| LNN51_RS24525 (LNN51_24530) | 2726..2923 | - | 198 | WP_047648389.1 | hypothetical protein | - |
| LNN51_RS24530 (LNN51_24535) | 2923..3630 | - | 708 | WP_053919845.1 | Rha family transcriptional regulator | - |
| LNN51_RS24535 (LNN51_24540) | 3630..3854 | - | 225 | WP_001436278.1 | host cell division inhibitor Icd-like protein | - |
| LNN51_RS24540 (LNN51_24545) | 4269..5231 | - | 963 | WP_168420629.1 | lytic replication protein | - |
| LNN51_RS24545 (LNN51_24550) | 5432..6430 | - | 999 | WP_074417224.1 | head processing protein | - |
| LNN51_RS24550 (LNN51_24555) | 6444..8126 | - | 1683 | WP_000201469.1 | portal protein | - |
| LNN51_RS24555 (LNN51_24560) | 8191..9576 | - | 1386 | WP_102218736.1 | hypothetical protein | - |
| LNN51_RS24560 (LNN51_24565) | 9671..10039 | - | 369 | WP_000156174.1 | hypothetical protein | - |
| LNN51_RS24565 (LNN51_24570) | 10039..11976 | - | 1938 | WP_063074798.1 | hypothetical protein | - |
| LNN51_RS24570 (LNN51_24575) | 11969..12589 | - | 621 | WP_000066534.1 | hypothetical protein | - |
| LNN51_RS24575 (LNN51_24580) | 12579..13025 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| LNN51_RS24580 (LNN51_24585) | 13025..13351 | - | 327 | WP_000457140.1 | holin | - |
| LNN51_RS24585 (LNN51_24590) | 13455..13692 | + | 238 | Protein_14 | recombinase family protein | - |
| LNN51_RS24590 (LNN51_24595) | 13888..14460 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| LNN51_RS24595 (LNN51_24600) | 14532..14960 | + | 429 | WP_074152847.1 | phage tail protein | - |
| LNN51_RS24600 (LNN51_24605) | 15004..15435 | + | 432 | WP_187788808.1 | hypothetical protein | - |
| LNN51_RS24605 (LNN51_24610) | 15438..15854 | + | 417 | WP_097415175.1 | tail fiber assembly protein | - |
| LNN51_RS24610 (LNN51_24615) | 15826..16428 | - | 603 | WP_063074797.1 | tail fiber assembly protein | - |
| LNN51_RS24615 (LNN51_24620) | 16428..18104 | - | 1677 | WP_242899107.1 | tail fiber protein | - |
| LNN51_RS24620 (LNN51_24625) | 18107..18553 | - | 447 | WP_032220795.1 | hypothetical protein | - |
| LNN51_RS24625 (LNN51_24630) | 18648..19493 | - | 846 | WP_063074754.1 | hypothetical protein | - |
| LNN51_RS24630 (LNN51_24635) | 19504..20934 | - | 1431 | WP_063074755.1 | hypothetical protein | - |
| LNN51_RS24635 (LNN51_24640) | 20931..21305 | - | 375 | WP_032220997.1 | hypothetical protein | - |
| LNN51_RS24640 (LNN51_24645) | 21311..25441 | - | 4131 | WP_224173539.1 | transglycosylase | - |
| LNN51_RS24645 (LNN51_24650) | 25496..26317 | - | 822 | WP_063074821.1 | hypothetical protein | - |
| LNN51_RS24650 (LNN51_24655) | 26706..27461 | + | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| LNN51_RS24655 (LNN51_24660) | 27843..28550 | - | 708 | WP_000021878.1 | hypothetical protein | - |
| LNN51_RS24660 (LNN51_24665) | 28566..29117 | - | 552 | WP_032220996.1 | hypothetical protein | - |
| LNN51_RS24665 (LNN51_24670) | 29170..29661 | - | 492 | WP_032220995.1 | hypothetical protein | - |
| LNN51_RS24670 (LNN51_24675) | 29670..30218 | - | 549 | WP_000870304.1 | hypothetical protein | - |
| LNN51_RS24675 (LNN51_24680) | 30310..31044 | - | 735 | WP_000801019.1 | hypothetical protein | - |
| LNN51_RS24680 (LNN51_24685) | 31088..32746 | - | 1659 | WP_001033849.1 | tail sheath protein | - |
| LNN51_RS24685 (LNN51_24690) | 32814..33092 | - | 279 | WP_024259817.1 | Ig-like domain-containing protein | - |
| LNN51_RS24690 (LNN51_24695) | 33239..34936 | - | 1698 | WP_137441744.1 | capsid protein | - |
| LNN51_RS24695 (LNN51_24700) | 35095..35487 | + | 393 | WP_224173540.1 | hypothetical protein | - |
| LNN51_RS24700 (LNN51_24705) | 35504..35962 | + | 459 | WP_000020026.1 | hypothetical protein | - |
| LNN51_RS24705 (LNN51_24710) | 36116..36574 | - | 459 | WP_000243176.1 | hypothetical protein | - |
| LNN51_RS24710 (LNN51_24715) | 36645..37448 | - | 804 | WP_005031630.1 | hypothetical protein | - |
| LNN51_RS24715 (LNN51_24720) | 37448..37732 | - | 285 | WP_121272465.1 | PAAR domain-containing protein | - |
| LNN51_RS24720 (LNN51_24725) | 38000..38956 | + | 957 | WP_001557707.1 | plasmid segregation protein ParM | - |
| LNN51_RS24725 (LNN51_24730) | 38970..39308 | + | 339 | WP_102218733.1 | plasmid partitioning/stability family protein | - |
| LNN51_RS24730 (LNN51_24735) | 39596..40237 | + | 642 | WP_016262372.1 | Chromosome-partitioning ATPase Soj | VF |
| LNN51_RS24735 (LNN51_24740) | 40230..40517 | + | 288 | WP_000595051.1 | hypothetical protein | - |
| LNN51_RS24740 (LNN51_24745) | 40786..42447 | + | 1662 | WP_001287146.1 | glutamine--tRNA ligase | - |
| LNN51_RS24745 (LNN51_24750) | 42496..43314 | - | 819 | Protein_46 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LNN51_RS24750 (LNN51_24755) | 43394..44044 | - | 651 | WP_032153356.1 | hypothetical protein | - |
| LNN51_RS24755 (LNN51_24760) | 44058..44963 | - | 906 | WP_001258014.1 | recombination-associated protein RdgC | - |
| LNN51_RS24760 (LNN51_24765) | 45023..45676 | - | 654 | WP_000828873.1 | hypothetical protein | - |
| LNN51_RS24765 (LNN51_24770) | 45673..46653 | - | 981 | WP_000046499.1 | hypothetical protein | - |
| LNN51_RS24770 (LNN51_24775) | 46657..47424 | - | 768 | WP_000203290.1 | hypothetical protein | - |
| LNN51_RS24775 (LNN51_24780) | 47421..48212 | - | 792 | WP_000532305.1 | hypothetical protein | - |
| LNN51_RS24780 (LNN51_24785) | 48375..48677 | + | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNN51_RS24785 (LNN51_24790) | 48748..49086 | + | 339 | WP_000806445.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LNN51_RS24790 (LNN51_24795) | 49143..49328 | + | 186 | Protein_55 | hypothetical protein | - |
| LNN51_RS24795 (LNN51_24800) | 49365..50093 | + | 729 | WP_000986754.1 | hypothetical protein | - |
| LNN51_RS24800 (LNN51_24805) | 50127..51320 | - | 1194 | WP_102218742.1 | phage tail protein | - |
| LNN51_RS24805 (LNN51_24810) | 51313..51642 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| LNN51_RS24810 (LNN51_24815) | 51971..52624 | - | 654 | WP_000410952.1 | hypothetical protein | - |
| LNN51_RS24815 (LNN51_24820) | 52970..53791 | + | 822 | WP_001427910.1 | hypothetical protein | - |
| LNN51_RS24820 (LNN51_24825) | 53831..54181 | - | 351 | WP_000201621.1 | hypothetical protein | - |
| LNN51_RS24825 (LNN51_24830) | 54327..54611 | - | 285 | WP_000717719.1 | hypothetical protein | - |
| LNN51_RS24830 (LNN51_24835) | 54671..55597 | - | 927 | WP_001054016.1 | Rha family transcriptional regulator | - |
| LNN51_RS24835 (LNN51_24840) | 55597..55812 | - | 216 | WP_000201263.1 | host cell division inhibitor Icd-like protein | - |
| LNN51_RS24840 (LNN51_24845) | 55831..55950 | - | 120 | WP_071526433.1 | ash family protein | - |
| LNN51_RS24845 (LNN51_24850) | 56126..56293 | - | 168 | WP_168420614.1 | hypothetical protein | - |
| LNN51_RS24850 (LNN51_24855) | 56625..57203 | - | 579 | WP_023908602.1 | Ref family recombination enhancement nuclease | - |
| LNN51_RS24855 (LNN51_24860) | 57476..58087 | + | 612 | WP_183022158.1 | DUF4406 domain-containing protein | - |
| LNN51_RS24860 (LNN51_24865) | 58117..58401 | + | 285 | WP_052936027.1 | DNA-binding protein | - |
| LNN51_RS24865 (LNN51_24870) | 58391..58825 | + | 435 | WP_113406458.1 | hypothetical protein | - |
| LNN51_RS24870 (LNN51_24875) | 58822..59097 | + | 276 | WP_058799016.1 | DUF4752 family protein | - |
| LNN51_RS24875 (LNN51_24880) | 59094..59318 | + | 225 | WP_048256676.1 | hypothetical protein | - |
| LNN51_RS24880 (LNN51_24885) | 59315..59626 | + | 312 | WP_000022451.1 | hypothetical protein | - |
| LNN51_RS24885 (LNN51_24890) | 59623..60315 | + | 693 | WP_000613619.1 | metallophosphoesterase | - |
| LNN51_RS24890 (LNN51_24895) | 60455..61408 | + | 954 | WP_224173527.1 | DUF968 domain-containing protein | - |
| LNN51_RS24895 (LNN51_24900) | 61422..61720 | + | 299 | Protein_76 | hypothetical protein | - |
| LNN51_RS24900 (LNN51_24905) | 61707..62294 | + | 588 | WP_047647124.1 | ead/Ea22-like family protein | - |
| LNN51_RS24905 (LNN51_24910) | 62291..62977 | + | 687 | WP_097290468.1 | ead/Ea22-like family protein | - |
| LNN51_RS24910 (LNN51_24915) | 62979..63173 | + | 195 | WP_000224731.1 | hypothetical protein | - |
| LNN51_RS24915 (LNN51_24920) | 63175..63384 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| LNN51_RS24920 (LNN51_24925) | 63381..63506 | + | 126 | Protein_81 | DUF551 domain-containing protein | - |
| LNN51_RS24925 (LNN51_24930) | 64017..64208 | + | 192 | WP_242806062.1 | DUF551 domain-containing protein | - |
| LNN51_RS24930 (LNN51_24935) | 64201..64482 | + | 282 | WP_102218741.1 | ASCH domain-containing protein | - |
| LNN51_RS24935 (LNN51_24940) | 64475..64879 | + | 405 | WP_080077662.1 | hypothetical protein | - |
| LNN51_RS24940 (LNN51_24945) | 64892..65185 | + | 294 | WP_075660654.1 | hypothetical protein | - |
| LNN51_RS24945 (LNN51_24950) | 65185..65361 | + | 177 | WP_157902266.1 | hypothetical protein | - |
| LNN51_RS24950 (LNN51_24955) | 65441..65650 | + | 210 | WP_075660655.1 | hypothetical protein | - |
| LNN51_RS24955 (LNN51_24960) | 65647..66405 | + | 759 | WP_072756859.1 | hypothetical protein | - |
| LNN51_RS24960 (LNN51_24965) | 66720..66971 | + | 252 | WP_063074807.1 | DNA polymerase III subunit theta | - |
| LNN51_RS24965 (LNN51_24970) | 67095..67484 | + | 390 | WP_168420616.1 | S24 family peptidase | - |
| LNN51_RS24970 (LNN51_24975) | 67557..67778 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LNN51_RS24975 (LNN51_24980) | 67778..68158 | + | 381 | WP_168420618.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LNN51_RS24980 (LNN51_24985) | 68242..69042 | - | 801 | WP_168420620.1 | hypothetical protein | - |
| LNN51_RS24985 (LNN51_24990) | 69049..69711 | - | 663 | WP_168420622.1 | DUF2829 domain-containing protein | - |
| LNN51_RS24990 (LNN51_24995) | 69726..70220 | - | 495 | WP_000640906.1 | dUTP diphosphatase | - |
| LNN51_RS24995 (LNN51_25000) | 70217..70693 | - | 477 | WP_000861174.1 | hypothetical protein | - |
| LNN51_RS25000 (LNN51_25005) | 70690..71034 | - | 345 | WP_001191776.1 | hypothetical protein | - |
| LNN51_RS25005 (LNN51_25010) | 71108..72136 | - | 1029 | WP_168420624.1 | tyrosine-type recombinase/integrase | - |
| LNN51_RS25010 (LNN51_25015) | 72531..73568 | + | 1038 | WP_023908617.1 | hypothetical protein | - |
| LNN51_RS25015 (LNN51_25020) | 73596..75104 | - | 1509 | WP_000897063.1 | hypothetical protein | - |
| LNN51_RS25020 (LNN51_25025) | 75104..76468 | - | 1365 | WP_000060660.1 | hypothetical protein | - |
| LNN51_RS25025 (LNN51_25030) | 76465..76857 | - | 393 | WP_000435256.1 | hypothetical protein | - |
| LNN51_RS25030 (LNN51_25035) | 76966..77151 | - | 186 | WP_001130998.1 | hypothetical protein | - |
| LNN51_RS25035 (LNN51_25040) | 77358..77933 | - | 576 | WP_175421541.1 | hypothetical protein | - |
| LNN51_RS25045 (LNN51_25050) | 78617..79444 | - | 828 | WP_032220960.1 | SPFH domain-containing protein | - |
| LNN51_RS25065 (LNN51_25070) | 82018..83241 | - | 1224 | WP_236469954.1 | DivIVA domain-containing protein | - |
| LNN51_RS25070 (LNN51_25075) | 83636..83836 | - | 201 | WP_001238268.1 | hypothetical protein | - |
| LNN51_RS25075 | 83851..84159 | - | 309 | WP_001350898.1 | VRR-NUC domain-containing protein | - |
| LNN51_RS25080 (LNN51_25085) | 84482..84742 | - | 261 | WP_069067271.1 | hypothetical protein | - |
| LNN51_RS25085 (LNN51_25090) | 84745..85179 | - | 435 | WP_163419474.1 | olxA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|