MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP086480 Location: 2546626..2547774 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: chromosome
Accession: NZ_CP086480 Location: 2546626..2547774 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN46_RS12180 (2542029) | 2542029..2542205 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LNN46_RS12185 (2542427) | 2542427..2542657 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LNN46_RS12190 (2542749) | 2542749..2544710 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LNN46_RS12195 (2544783) | 2544783..2545319 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LNN46_RS12200 (2545372) | 2545372..2546586 | + | 1215 | WP_001326689.1 | BenE family transporter YdcO | - |
| LNN46_RS12205 (2546626) | 2546626..2547834 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| LNN46_RS12210 (2547842) | 2547842..2548267 | + | 426 | Protein_2406 | IS200/IS605 family transposase | - |
| LNN46_RS12215 (2548366) | 2548366..2549034 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LNN46_RS12220 (2549336) | 2549336..2549929 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LNN46_RS12225 (2549926) | 2549926..2550918 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LNN46_RS12230 (2551042) | 2551042..2552022 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| LNN46_RS12235 (2552014) | 2552014..2552553 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |