MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89996 bp
Accession: NZ_CP086473 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T20-ESBL Replicon: plasmid pEc-050-T20-ESBL_3
Accession: NZ_CP086473 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T20-ESBL Replicon: plasmid pEc-050-T20-ESBL_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN47_RS24520 (LNN47_24525) | 757..924 | + | 168 | WP_168420614.1 | hypothetical protein | - |
| LNN47_RS24525 (LNN47_24530) | 1100..1219 | + | 120 | WP_071526433.1 | ash family protein | - |
| LNN47_RS24530 (LNN47_24535) | 1238..1453 | + | 216 | WP_000201263.1 | host cell division inhibitor Icd-like protein | - |
| LNN47_RS24535 (LNN47_24540) | 1453..2379 | + | 927 | WP_001054016.1 | Rha family transcriptional regulator | - |
| LNN47_RS24540 (LNN47_24545) | 2439..2723 | + | 285 | WP_000717719.1 | hypothetical protein | - |
| LNN47_RS24545 (LNN47_24550) | 2860..3219 | + | 360 | WP_157704636.1 | hypothetical protein | - |
| LNN47_RS24550 (LNN47_24555) | 3259..4080 | - | 822 | WP_001427910.1 | hypothetical protein | - |
| LNN47_RS24555 (LNN47_24560) | 4426..5079 | + | 654 | WP_000410952.1 | hypothetical protein | - |
| LNN47_RS24560 (LNN47_24565) | 5408..5737 | + | 330 | WP_000542383.1 | hypothetical protein | - |
| LNN47_RS24565 (LNN47_24570) | 5730..6923 | + | 1194 | WP_102218742.1 | phage tail protein | - |
| LNN47_RS24570 (LNN47_24575) | 6957..7685 | - | 729 | WP_000986754.1 | hypothetical protein | - |
| LNN47_RS24575 (LNN47_24580) | 7722..7907 | - | 186 | Protein_12 | hypothetical protein | - |
| LNN47_RS24580 (LNN47_24585) | 7964..8302 | - | 339 | WP_000806445.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LNN47_RS24585 (LNN47_24590) | 8373..8675 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNN47_RS24590 (LNN47_24595) | 8838..9629 | + | 792 | WP_000532305.1 | hypothetical protein | - |
| LNN47_RS24595 (LNN47_24600) | 9626..10393 | + | 768 | WP_000203290.1 | hypothetical protein | - |
| LNN47_RS24600 (LNN47_24605) | 10397..11377 | + | 981 | WP_000046499.1 | hypothetical protein | - |
| LNN47_RS24605 (LNN47_24610) | 11374..12027 | + | 654 | WP_000828873.1 | hypothetical protein | - |
| LNN47_RS24610 (LNN47_24615) | 12087..12992 | + | 906 | WP_001258014.1 | recombination-associated protein RdgC | - |
| LNN47_RS24615 (LNN47_24620) | 13006..13656 | + | 651 | WP_032153356.1 | hypothetical protein | - |
| LNN47_RS24620 (LNN47_24625) | 13736..14554 | + | 819 | Protein_21 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LNN47_RS24625 (LNN47_24630) | 14603..16264 | - | 1662 | WP_001287146.1 | glutamine--tRNA ligase | - |
| LNN47_RS24630 (LNN47_24635) | 16533..16820 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| LNN47_RS24635 (LNN47_24640) | 16813..17454 | - | 642 | WP_016262372.1 | AAA family ATPase | - |
| LNN47_RS24640 (LNN47_24645) | 17742..18080 | - | 339 | WP_102218733.1 | plasmid partitioning/stability family protein | - |
| LNN47_RS24645 (LNN47_24650) | 18094..19050 | - | 957 | WP_001557707.1 | plasmid segregation protein ParM | - |
| LNN47_RS24650 (LNN47_24655) | 19318..19602 | + | 285 | WP_121272465.1 | PAAR domain-containing protein | - |
| LNN47_RS24655 (LNN47_24660) | 19602..20405 | + | 804 | WP_005031630.1 | hypothetical protein | - |
| LNN47_RS24660 (LNN47_24665) | 20476..20934 | + | 459 | WP_000243176.1 | hypothetical protein | - |
| LNN47_RS24665 (LNN47_24670) | 21088..21546 | - | 459 | WP_000020026.1 | hypothetical protein | - |
| LNN47_RS24670 (LNN47_24675) | 21563..21955 | - | 393 | WP_224173540.1 | hypothetical protein | - |
| LNN47_RS24675 (LNN47_24680) | 22114..23811 | + | 1698 | WP_137441744.1 | capsid protein | - |
| LNN47_RS24680 (LNN47_24685) | 23958..24236 | + | 279 | WP_024259817.1 | Ig-like domain-containing protein | - |
| LNN47_RS24685 (LNN47_24690) | 24304..25962 | + | 1659 | WP_001033849.1 | tail sheath protein | - |
| LNN47_RS24690 (LNN47_24695) | 26006..26740 | + | 735 | WP_000801019.1 | hypothetical protein | - |
| LNN47_RS24695 (LNN47_24700) | 26832..27380 | + | 549 | WP_000870304.1 | hypothetical protein | - |
| LNN47_RS24700 (LNN47_24705) | 27389..27880 | + | 492 | WP_032220995.1 | hypothetical protein | - |
| LNN47_RS24705 (LNN47_24710) | 27933..28484 | + | 552 | WP_032220996.1 | hypothetical protein | - |
| LNN47_RS24710 (LNN47_24715) | 28500..29207 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| LNN47_RS24715 (LNN47_24720) | 29589..30344 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| LNN47_RS24720 (LNN47_24725) | 30733..31554 | + | 822 | WP_063074821.1 | hypothetical protein | - |
| LNN47_RS24725 (LNN47_24730) | 31609..35739 | + | 4131 | WP_224173539.1 | transglycosylase | - |
| LNN47_RS24730 (LNN47_24735) | 35745..36119 | + | 375 | WP_032220997.1 | hypothetical protein | - |
| LNN47_RS24735 (LNN47_24740) | 36116..37546 | + | 1431 | WP_063074755.1 | hypothetical protein | - |
| LNN47_RS24740 (LNN47_24745) | 37557..38402 | + | 846 | WP_063074754.1 | hypothetical protein | - |
| LNN47_RS24745 (LNN47_24750) | 38497..38943 | + | 447 | WP_032220795.1 | hypothetical protein | - |
| LNN47_RS24750 (LNN47_24755) | 38946..40628 | + | 1683 | WP_168420631.1 | tail fiber protein | - |
| LNN47_RS24755 (LNN47_24760) | 40631..41047 | + | 417 | WP_097415175.1 | tail fiber assembly protein | - |
| LNN47_RS24760 (LNN47_24765) | 41019..41621 | - | 603 | WP_063074797.1 | tail fiber assembly protein | - |
| LNN47_RS24765 (LNN47_24770) | 41621..42049 | - | 429 | WP_024174668.1 | phage tail protein | - |
| LNN47_RS24770 (LNN47_24775) | 42090..42518 | - | 429 | WP_074152847.1 | phage tail protein | - |
| LNN47_RS24775 (LNN47_24780) | 42590..43162 | + | 573 | WP_001165547.1 | recombinase family protein | - |
| LNN47_RS24780 (LNN47_24785) | 43358..43595 | - | 238 | Protein_53 | recombinase family protein | - |
| LNN47_RS24785 (LNN47_24790) | 43699..44025 | + | 327 | WP_000457140.1 | holin | - |
| LNN47_RS24790 (LNN47_24795) | 44025..44471 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| LNN47_RS24795 (LNN47_24800) | 44461..45081 | + | 621 | WP_000066534.1 | hypothetical protein | - |
| LNN47_RS24800 (LNN47_24805) | 45074..47011 | + | 1938 | WP_063074798.1 | hypothetical protein | - |
| LNN47_RS24805 (LNN47_24810) | 47011..47379 | + | 369 | WP_000156174.1 | hypothetical protein | - |
| LNN47_RS24810 (LNN47_24815) | 47474..48859 | + | 1386 | WP_102218736.1 | hypothetical protein | - |
| LNN47_RS24815 (LNN47_24820) | 48924..50606 | + | 1683 | WP_000201469.1 | portal protein | - |
| LNN47_RS24820 (LNN47_24825) | 50620..51618 | + | 999 | WP_074417224.1 | head processing protein | - |
| LNN47_RS24825 (LNN47_24830) | 51819..52781 | + | 963 | WP_168420629.1 | lytic replication protein | - |
| LNN47_RS24830 (LNN47_24835) | 53196..53420 | + | 225 | WP_001436278.1 | host cell division inhibitor Icd-like protein | - |
| LNN47_RS24835 (LNN47_24840) | 53420..54127 | + | 708 | WP_053919845.1 | Rha family transcriptional regulator | - |
| LNN47_RS24840 (LNN47_24845) | 54127..54324 | + | 198 | WP_047648389.1 | hypothetical protein | - |
| LNN47_RS24845 (LNN47_24850) | 54357..54842 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| LNN47_RS24850 (LNN47_24855) | 54994..61830 | + | 6837 | WP_168420627.1 | SNF2-related protein | - |
| LNN47_RS24855 (LNN47_24860) | 61867..62301 | + | 435 | WP_163419474.1 | olxA | - |
| LNN47_RS24860 (LNN47_24865) | 62304..62564 | + | 261 | WP_069067271.1 | hypothetical protein | - |
| LNN47_RS24865 | 62887..63195 | + | 309 | WP_001350898.1 | VRR-NUC domain-containing protein | - |
| LNN47_RS24870 (LNN47_24875) | 63210..63410 | + | 201 | WP_001238268.1 | hypothetical protein | - |
| LNN47_RS24875 (LNN47_24880) | 63805..65028 | + | 1224 | WP_236469954.1 | DivIVA domain-containing protein | - |
| LNN47_RS24895 (LNN47_24900) | 67602..68429 | + | 828 | WP_032220960.1 | SPFH domain-containing protein | - |
| LNN47_RS24905 (LNN47_24910) | 69113..69688 | + | 576 | WP_175421541.1 | hypothetical protein | - |
| LNN47_RS24910 (LNN47_24915) | 69895..70080 | + | 186 | WP_001130998.1 | hypothetical protein | - |
| LNN47_RS24915 (LNN47_24920) | 70189..70581 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| LNN47_RS24920 (LNN47_24925) | 70578..71942 | + | 1365 | WP_000060660.1 | hypothetical protein | - |
| LNN47_RS24925 (LNN47_24930) | 71942..73450 | + | 1509 | WP_000897063.1 | hypothetical protein | - |
| LNN47_RS24930 (LNN47_24935) | 73478..74515 | - | 1038 | WP_023908617.1 | hypothetical protein | - |
| LNN47_RS24935 (LNN47_24940) | 74910..75938 | + | 1029 | WP_168420624.1 | tyrosine-type recombinase/integrase | - |
| LNN47_RS24940 (LNN47_24945) | 76012..76356 | + | 345 | WP_001191776.1 | hypothetical protein | - |
| LNN47_RS24945 (LNN47_24950) | 76353..76829 | + | 477 | WP_000861174.1 | hypothetical protein | - |
| LNN47_RS24950 (LNN47_24955) | 76826..77320 | + | 495 | WP_000640906.1 | dUTP diphosphatase | - |
| LNN47_RS24955 (LNN47_24960) | 77335..77997 | + | 663 | WP_168420622.1 | DUF2829 domain-containing protein | - |
| LNN47_RS24960 (LNN47_24965) | 78004..78804 | + | 801 | WP_168420620.1 | hypothetical protein | - |
| LNN47_RS24965 (LNN47_24970) | 78888..79268 | - | 381 | WP_168420618.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LNN47_RS24970 (LNN47_24975) | 79268..79489 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LNN47_RS24975 (LNN47_24980) | 79562..79951 | - | 390 | WP_168420616.1 | S24 family peptidase | - |
| LNN47_RS24980 (LNN47_24985) | 80075..80326 | - | 252 | WP_063074807.1 | DNA polymerase III subunit theta | - |
| LNN47_RS24985 (LNN47_24990) | 80641..81399 | - | 759 | WP_072756859.1 | hypothetical protein | - |
| LNN47_RS24990 (LNN47_24995) | 81396..81605 | - | 210 | WP_075660655.1 | hypothetical protein | - |
| LNN47_RS24995 (LNN47_25000) | 81685..81861 | - | 177 | WP_157902266.1 | hypothetical protein | - |
| LNN47_RS25000 (LNN47_25005) | 81861..82154 | - | 294 | WP_075660654.1 | hypothetical protein | - |
| LNN47_RS25005 (LNN47_25010) | 82167..82571 | - | 405 | WP_080077662.1 | hypothetical protein | - |
| LNN47_RS25010 (LNN47_25015) | 82564..82845 | - | 282 | WP_102218741.1 | ASCH domain-containing protein | - |
| LNN47_RS25015 (LNN47_25020) | 82838..83029 | - | 192 | WP_242806062.1 | DUF551 domain-containing protein | - |
| LNN47_RS25020 (LNN47_25025) | 83540..83665 | - | 126 | Protein_97 | DUF551 domain-containing protein | - |
| LNN47_RS25025 (LNN47_25030) | 83662..83871 | - | 210 | WP_000951710.1 | hypothetical protein | - |
| LNN47_RS25030 (LNN47_25035) | 83873..84067 | - | 195 | WP_000224731.1 | hypothetical protein | - |
| LNN47_RS25035 (LNN47_25040) | 84069..84755 | - | 687 | WP_097290468.1 | ead/Ea22-like family protein | - |
| LNN47_RS25040 (LNN47_25045) | 84752..85339 | - | 588 | WP_047647124.1 | ead/Ea22-like family protein | - |
| LNN47_RS25045 (LNN47_25050) | 85326..85624 | - | 299 | Protein_102 | hypothetical protein | - |
| LNN47_RS25050 (LNN47_25055) | 85638..86591 | - | 954 | WP_224173527.1 | DUF968 domain-containing protein | - |
| LNN47_RS25055 (LNN47_25060) | 86731..87423 | - | 693 | WP_000613619.1 | metallophosphoesterase | - |
| LNN47_RS25060 (LNN47_25065) | 87420..87731 | - | 312 | WP_000022451.1 | hypothetical protein | - |
| LNN47_RS25065 (LNN47_25070) | 87728..87952 | - | 225 | WP_048256676.1 | hypothetical protein | - |
| LNN47_RS25070 (LNN47_25075) | 87949..88224 | - | 276 | WP_058799016.1 | DUF4752 family protein | - |
| LNN47_RS25075 (LNN47_25080) | 88221..88655 | - | 435 | WP_113406458.1 | hypothetical protein | - |
| LNN47_RS25080 (LNN47_25085) | 88645..88929 | - | 285 | WP_052936027.1 | DNA-binding protein | - |
| LNN47_RS25085 (LNN47_25090) | 88959..89570 | - | 612 | WP_183022158.1 | DUF4406 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|