MGE detailed information
MGE type: Genomic_island MGE length: 30659 bp
Accession: NZ_CP086298 Location: 292006..322664 Organism: Burkholderia ambifaria strain B21-006 Replicon: chromosome
Accession: NZ_CP086298 Location: 292006..322664 Organism: Burkholderia ambifaria strain B21-006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL998_RS17405 (LL998_17415) | 288482..288781 | + | 300 | WP_105831124.1 | YXWGXW repeat-containing protein | - |
| LL998_RS17410 (LL998_17420) | 288998..289750 | + | 753 | WP_229081964.1 | RNA polymerase sigma factor | - |
| LL998_RS17415 (LL998_17425) | 289747..290166 | + | 420 | WP_175659155.1 | hypothetical protein | - |
| LL998_RS17420 (LL998_17430) | 290163..290663 | + | 501 | WP_229081965.1 | periplasmic heavy metal sensor | - |
| LL998_RS17425 (LL998_17435) | 290809..291996 | + | 1188 | WP_229081967.1 | SGNH/GDSL hydrolase family protein | - |
| LL998_RS17430 (LL998_17440) | 292006..292962 | - | 957 | WP_126225474.1 | PDR/VanB family oxidoreductase | - |
| LL998_RS17435 (LL998_17445) | 292964..294013 | - | 1050 | WP_229081968.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LL998_RS17440 (LL998_17450) | 294126..295055 | + | 930 | WP_212069471.1 | LysR family transcriptional regulator | - |
| LL998_RS17445 (LL998_17455) | 295184..295594 | - | 411 | WP_229081970.1 | hypothetical protein | - |
| LL998_RS17450 (LL998_17460) | 295697..296029 | - | 333 | WP_229081972.1 | barstar family protein | - |
| LL998_RS17455 (LL998_17465) | 296171..296425 | - | 255 | WP_126225469.1 | hypothetical protein | - |
| LL998_RS17460 (LL998_17470) | 296561..296953 | + | 393 | WP_126225468.1 | hypothetical protein | - |
| LL998_RS17465 (LL998_17475) | 297487..298881 | + | 1395 | WP_229081973.1 | DUF1800 domain-containing protein | - |
| LL998_RS17470 (LL998_17480) | 298884..300047 | + | 1164 | WP_229081975.1 | DUF1501 domain-containing protein | - |
| LL998_RS17475 (LL998_17485) | 300106..300324 | + | 219 | WP_229063867.1 | YXWGXW repeat-containing protein | - |
| LL998_RS17480 (LL998_17490) | 300355..300509 | - | 155 | Protein_264 | integrase | - |
| LL998_RS17485 (LL998_17495) | 300830..301210 | + | 381 | WP_229081977.1 | DUF4377 domain-containing protein | - |
| LL998_RS17490 (LL998_17500) | 301346..301624 | + | 279 | WP_006757580.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LL998_RS17495 (LL998_17505) | 301612..301902 | + | 291 | WP_229081981.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LL998_RS17500 (LL998_17510) | 302045..303433 | - | 1389 | WP_229081982.1 | DHA2 family efflux MFS transporter permease subunit | - |
| LL998_RS17505 (LL998_17515) | 303574..304443 | + | 870 | WP_175659163.1 | HTH-type transcriptional regulator YofA | VF |
| LL998_RS17510 (LL998_17520) | 305170..306396 | - | 1227 | WP_229081983.1 | acyltransferase | - |
| LL998_RS17515 (LL998_17525) | 306623..307825 | + | 1203 | WP_229081984.1 | glycosyltransferase family 87 protein | - |
| LL998_RS17520 (LL998_17530) | 308076..308312 | + | 237 | WP_006753828.1 | DNA-binding protein | Antitoxin Detail |
| LL998_RS17525 (LL998_17535) | 308299..308715 | + | 417 | WP_175741337.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LL998_RS17530 (LL998_17540) | 309290..309493 | + | 204 | WP_006751843.1 | cold-shock protein | - |
| LL998_RS17535 (LL998_17545) | 309955..310218 | + | 264 | WP_006751842.1 | translation initiation factor IF-1 | - |
| LL998_RS17540 (LL998_17550) | 310512..310625 | - | 114 | Protein_276 | 4-hydroxy-2-oxovalerate aldolase | - |
| LL998_RS17545 (LL998_17555) | 310621..310887 | + | 267 | Protein_277 | FAD-binding protein | - |
| LL998_RS17550 (LL998_17560) | 310891..311405 | + | 515 | Protein_278 | Protein YrdA | VF |
| LL998_RS17555 (LL998_17565) | 311682..311930 | + | 249 | WP_175705882.1 | hypothetical protein | - |
| LL998_RS17560 (LL998_17570) | 311954..313117 | - | 1164 | WP_229081986.1 | MFS transporter | - |
| LL998_RS17565 (LL998_17575) | 313390..314034 | + | 645 | WP_011658900.1 | DUF1326 domain-containing protein | - |
| LL998_RS17570 (LL998_17580) | 314031..314822 | + | 792 | WP_175705880.1 | DUF2182 domain-containing protein | - |
| LL998_RS17575 (LL998_17585) | 314863..315210 | + | 348 | WP_229081988.1 | copper-binding protein | - |
| LL998_RS17580 (LL998_17590) | 315261..315659 | - | 399 | WP_229081990.1 | diguanylate cyclase | - |
| LL998_RS17585 (LL998_17595) | 315723..315900 | - | 178 | Protein_285 | AsnC family transcriptional regulator | - |
| LL998_RS17590 (LL998_17600) | 315948..316211 | - | 264 | WP_081467179.1 | putative deoxyribonuclease RhsB | VF |
| LL998_RS17595 (LL998_17605) | 316251..317915 | - | 1665 | WP_229081991.1 | tetratricopeptide repeat protein | - |
| LL998_RS17600 (LL998_17610) | 317917..319911 | - | 1995 | WP_229081993.1 | phospholipase | - |
| LL998_RS17605 (LL998_17615) | 319947..322664 | - | 2718 | WP_229081994.1 | Actin cross-linking toxin VgrG1 | VF |
| LL998_RS17610 (LL998_17620) | 322937..323398 | - | 462 | WP_229081996.1 | Lrp/AsnC family transcriptional regulator | - |
| LL998_RS17615 (LL998_17625) | 323513..324151 | + | 639 | WP_229081998.1 | LysE family transporter | - |
| LL998_RS17620 (LL998_17630) | 324259..326187 | - | 1929 | WP_229081999.1 | TonB-dependent receptor | - |
| LL998_RS17625 (LL998_17635) | 326820..327113 | + | 294 | WP_229082001.1 | hypothetical protein | - |
| LL998_RS17630 (LL998_17640) | 327167..327415 | - | 249 | WP_229082002.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|