MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75544 bp
Accession: NZ_CP086261 Location: 1..75544 Organism: Escherichia coli strain SCPM-O-B-9427 Replicon: plasmid pB-9427-2
Accession: NZ_CP086261 Location: 1..75544 Organism: Escherichia coli strain SCPM-O-B-9427 Replicon: plasmid pB-9427-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH79_RS26130 (LMH79_26155) | 270..585 | - | 316 | Protein_1 | hypothetical protein | - |
| LMH79_RS26135 (LMH79_26160) | 757..1737 | - | 981 | WP_000019440.1 | IS5-like element ISKpn26 family transposase | - |
| LMH79_RS26140 (LMH79_26165) | 2094..2444 | + | 351 | WP_000721276.1 | dispersin Aap | - |
| LMH79_RS26145 (LMH79_26170) | 2648..3121 | - | 474 | Protein_4 | IS3 family transposase | - |
| LMH79_RS26150 (LMH79_26175) | 3211..4593 | - | 1383 | Protein_5 | group II intron reverse transcriptase/maturase | - |
| LMH79_RS26155 (LMH79_26180) | 4650..5762 | + | 1113 | WP_001300563.1 | IS4-like element IS421 family transposase | - |
| LMH79_RS26160 (LMH79_26185) | 5929..6084 | - | 156 | WP_000587091.1 | hypothetical protein | - |
| LMH79_RS26165 (LMH79_26190) | 6742..7481 | - | 740 | Protein_8 | IS3 family transposase | - |
| LMH79_RS26170 (LMH79_26195) | 7538..7687 | - | 150 | Protein_9 | IS3 family transposase | - |
| LMH79_RS26175 (LMH79_26200) | 7677..7999 | + | 323 | Protein_10 | IS3 family transposase | - |
| LMH79_RS26180 (LMH79_26205) | 8215..9012 | + | 798 | WP_000769457.1 | aggregative adherence transcriptional regulator AggR | - |
| LMH79_RS27115 | 9113..9168 | + | 56 | Protein_12 | hypothetical protein | - |
| LMH79_RS26190 (LMH79_26215) | 9263..9484 | + | 222 | Protein_13 | transposase | - |
| LMH79_RS26195 (LMH79_26220) | 9760..10763 | - | 1004 | Protein_14 | IS110 family transposase | - |
| LMH79_RS26200 (LMH79_26225) | 10946..11926 | - | 981 | WP_000019440.1 | IS5-like element ISKpn26 family transposase | - |
| LMH79_RS26205 (LMH79_26230) | 12086..12238 | + | 153 | WP_000565591.1 | hypothetical protein | - |
| LMH79_RS26210 (LMH79_26235) | 12353..12676 | - | 324 | Protein_17 | transposase | - |
| LMH79_RS26215 (LMH79_26240) | 12741..13280 | - | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LMH79_RS26220 (LMH79_26245) | 13284..14312 | - | 1029 | WP_000869859.1 | class 1 isoprenoid biosynthesis enzyme | - |
| LMH79_RS26225 (LMH79_26250) | 14454..14627 | - | 174 | Protein_20 | integrase core domain-containing protein | - |
| LMH79_RS26230 (LMH79_26255) | 14748..15248 | + | 501 | WP_000033204.1 | helix-turn-helix domain-containing protein | - |
| LMH79_RS26235 (LMH79_26260) | 15704..15997 | - | 294 | Protein_22 | integrase core domain-containing protein | - |
| LMH79_RS26240 (LMH79_26265) | 15997..16128 | + | 132 | Protein_23 | IS3 family transposase | - |
| LMH79_RS26245 (LMH79_26270) | 16264..17802 | - | 1539 | WP_000997981.1 | IS66 family transposase | - |
| LMH79_RS26250 (LMH79_26275) | 17852..18199 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LMH79_RS26255 (LMH79_26280) | 18196..18597 | - | 402 | WP_000536899.1 | transposase | - |
| LMH79_RS26260 (LMH79_26285) | 18675..18944 | + | 270 | Protein_27 | ISL3 family transposase | - |
| LMH79_RS26265 (LMH79_26290) | 18994..19233 | - | 240 | Protein_28 | IS21 family transposase | - |
| LMH79_RS26270 (LMH79_26295) | 19370..19873 | - | 504 | WP_001390509.1 | aggregative adherence fimbria I major subunit AggA | - |
| LMH79_RS26275 (LMH79_26300) | 19975..20412 | - | 438 | WP_000914801.1 | aggregative adherence fimbria I minor subunit AggB | - |
| LMH79_RS26280 (LMH79_26305) | 20426..22954 | - | 2529 | WP_000858405.1 | aggregative adherence fimbria I usher protein AggC | - |
| LMH79_RS26285 (LMH79_26310) | 22968..23726 | - | 759 | WP_000702455.1 | aggregative adherence fimbria I chaperone AggD | - |
| LMH79_RS26290 (LMH79_26315) | 24150..24384 | + | 235 | Protein_33 | hypothetical protein | - |
| LMH79_RS26295 (LMH79_26320) | 24410..24493 | + | 84 | Protein_34 | hypothetical protein | - |
| LMH79_RS26300 (LMH79_26325) | 24551..25117 | - | 567 | WP_032159540.1 | recombinase family protein | - |
| LMH79_RS26305 (LMH79_26330) | 25122..25247 | - | 126 | Protein_36 | 3'-5' exonuclease | - |
| LMH79_RS26310 (LMH79_26335) | 25249..25626 | + | 378 | WP_000457137.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LMH79_RS26315 (LMH79_26340) | 25626..26899 | + | 1274 | Protein_38 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LMH79_RS26320 (LMH79_26345) | 26901..27317 | - | 417 | WP_001278815.1 | plasmid partitioning/stability family protein | - |
| LMH79_RS26325 (LMH79_26350) | 27310..28290 | - | 981 | WP_000688504.1 | plasmid segregation protein ParM | - |
| LMH79_RS26330 (LMH79_26355) | 28704..29012 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| LMH79_RS26335 (LMH79_26360) | 29099..29743 | - | 645 | WP_001144032.1 | ParA family protein | - |
| LMH79_RS26340 (LMH79_26365) | 29922..30728 | - | 807 | WP_000016961.1 | site-specific integrase | - |
| LMH79_RS26345 (LMH79_26370) | 30729..31034 | - | 306 | WP_001159872.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LMH79_RS26350 (LMH79_26375) | 31036..31254 | - | 219 | WP_000813638.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LMH79_RS26355 (LMH79_26380) | 31849..32079 | + | 231 | WP_001261288.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LMH79_RS26360 (LMH79_26385) | 32103..32504 | + | 402 | WP_001392130.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LMH79_RS26365 (LMH79_26390) | 32587..32742 | - | 156 | WP_000332512.1 | transposase domain-containing protein | - |
| LMH79_RS26370 (LMH79_26395) | 33081..33518 | + | 438 | WP_032159536.1 | hypothetical protein | - |
| LMH79_RS26375 (LMH79_26400) | 33828..34805 | + | 978 | WP_001387465.1 | RepB family plasmid replication initiator protein | - |
| LMH79_RS26380 (LMH79_26405) | 35084..35824 | - | 741 | WP_001066951.1 | tyrosine-type recombinase/integrase | - |
| LMH79_RS26385 (LMH79_26410) | 35945..36100 | - | 156 | WP_044713270.1 | hypothetical protein | - |
| LMH79_RS26390 (LMH79_26415) | 36193..36483 | - | 291 | Protein_53 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMH79_RS26395 (LMH79_26420) | 36470..36738 | - | 269 | Protein_54 | type II toxin-antitoxin system ParD family antitoxin | - |
| LMH79_RS26400 (LMH79_26425) | 36807..37082 | - | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LMH79_RS26405 (LMH79_26430) | 37082..37366 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LMH79_RS26410 (LMH79_26435) | 38274..39102 | - | 829 | Protein_57 | incFII family plasmid replication initiator RepA | - |
| LMH79_RS26415 (LMH79_26440) | 39095..39169 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| LMH79_RS26420 (LMH79_26445) | 39169..39300 | - | 132 | Protein_59 | protein CopA/IncA | - |
| LMH79_RS26425 (LMH79_26450) | 39407..39661 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| LMH79_RS26430 (LMH79_26455) | 39942..40922 | + | 981 | WP_000019440.1 | IS5-like element ISKpn26 family transposase | - |
| LMH79_RS26435 (LMH79_26460) | 41373..41585 | - | 213 | Protein_62 | ANR family transcriptional regulator | - |
| LMH79_RS26440 (LMH79_26465) | 41650..42327 | + | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
| LMH79_RS26445 (LMH79_26470) | 42327..42674 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LMH79_RS26450 (LMH79_26475) | 42694..44265 | + | 1572 | WP_000381397.1 | IS66-like element ISCro1 family transposase | - |
| LMH79_RS26455 (LMH79_26480) | 44319..44597 | - | 279 | Protein_66 | transposase domain-containing protein | - |
| LMH79_RS26460 (LMH79_26485) | 44620..44874 | - | 255 | Protein_67 | IS66 family insertion sequence element accessory protein TnpB | - |
| LMH79_RS26465 (LMH79_26490) | 44871..45305 | - | 435 | WP_001387845.1 | transposase | - |
| LMH79_RS26470 (LMH79_26495) | 45534..46094 | - | 561 | WP_228355614.1 | fertility inhibition protein FinO | - |
| LMH79_RS26475 (LMH79_26500) | 46149..46895 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| LMH79_RS26480 (LMH79_26505) | 46915..51586 | - | 4672 | Protein_71 | conjugative transfer relaxase/helicase TraI | - |
| LMH79_RS26485 (LMH79_26510) | 51642..52328 | + | 687 | Protein_72 | IS1 family transposase | - |
| LMH79_RS26490 (LMH79_26515) | 52322..52792 | - | 471 | WP_001390489.1 | PAS domain-containing protein | - |
| LMH79_RS26495 (LMH79_26520) | 52986..53369 | - | 384 | WP_001151564.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH79_RS26500 (LMH79_26525) | 53655..54302 | + | 648 | WP_000614287.1 | transglycosylase SLT domain-containing protein | - |
| LMH79_RS26505 (LMH79_26530) | 54620..55420 | - | 801 | WP_001234427.1 | DUF932 domain-containing protein | - |
| LMH79_RS26510 (LMH79_26535) | 55629..55917 | - | 289 | Protein_77 | DUF4158 domain-containing protein | - |
| LMH79_RS26515 (LMH79_26540) | 56047..56685 | + | 639 | Protein_78 | recombinase family protein | - |
| LMH79_RS26520 (LMH79_26545) | 56994..61088 | + | 4095 | WP_001034126.1 | serine protease autotransporter toxin SepA | - |
| LMH79_RS26525 (LMH79_26550) | 61383..61571 | - | 189 | Protein_80 | transposase domain-containing protein | - |
| LMH79_RS26530 (LMH79_26555) | 61682..62116 | + | 435 | WP_001387845.1 | transposase | - |
| LMH79_RS26535 (LMH79_26560) | 62113..62463 | + | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LMH79_RS26540 (LMH79_26565) | 62494..63918 | + | 1425 | Protein_83 | IS66-like element ISEc43 family transposase | - |
| LMH79_RS26545 (LMH79_26570) | 64172..65305 | - | 1134 | WP_228355615.1 | IS110-like element ISEc45 family transposase | - |
| LMH79_RS26550 (LMH79_26575) | 65743..65925 | + | 183 | Protein_85 | AraC family transcriptional regulator | - |
| LMH79_RS26555 (LMH79_26580) | 66280..67491 | - | 1212 | WP_000673201.1 | dispersin export-associated protein AatD | - |
| LMH79_RS26560 (LMH79_26585) | 67508..68137 | - | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| LMH79_RS26565 (LMH79_26590) | 68130..68951 | - | 822 | WP_000810824.1 | dispersin export-associated protein AatB | - |
| LMH79_RS26570 (LMH79_26595) | 68848..70086 | - | 1239 | WP_001216021.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| LMH79_RS26575 (LMH79_26600) | 70083..71213 | - | 1131 | WP_000209219.1 | dispersin export ABC transporter permease subunit AatP | - |
| LMH79_RS26580 (LMH79_26605) | 71593..71763 | + | 171 | Protein_91 | IS3 family transposase | - |
| LMH79_RS26585 (LMH79_26610) | 71924..72121 | + | 198 | Protein_92 | transposase | - |
| LMH79_RS26590 (LMH79_26615) | 72255..73986 | - | 1732 | Protein_93 | serine protease autotransporter toxin SepA | - |
| LMH79_RS26595 (LMH79_26620) | 74297..75325 | - | 1029 | Protein_94 | IS630 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|