MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP086118 Location: 2449114..2461199 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Accession: NZ_CP086118 Location: 2449114..2461199 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLY43_RS11935 (2445035) | 2445035..2446237 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| LLY43_RS11940 (2446250) | 2446250..2447701 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| LLY43_RS11945 (2447845) | 2447845..2448852 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| LLY43_RS11950 (2449111) | 2449111..2450577 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| LLY43_RS11955 (2451385) | 2451385..2452099 | + | 715 | Protein_2341 | helix-turn-helix domain-containing protein | - |
| LLY43_RS11960 (2452155) | 2452155..2453063 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| LLY43_RS11965 (2453206) | 2453206..2453538 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| LLY43_RS11970 (2453528) | 2453528..2453743 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| LLY43_RS11975 (2453895) | 2453895..2454143 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LLY43_RS11980 (2454133) | 2454133..2454417 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LLY43_RS11985 (2454588) | 2454588..2454977 | + | 390 | WP_000194089.1 | RidA family protein | - |
| LLY43_RS11990 (2455029) | 2455029..2456108 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| LLY43_RS11995 (2456301) | 2456301..2456789 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LLY43_RS12000 (2456834) | 2456834..2458342 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| LLY43_RS12005 (2458332) | 2458332..2459573 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| LLY43_RS12010 (2459643) | 2459643..2461199 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| LLY43_RS12015 (2461376) | 2461376..2462662 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| LLY43_RS12020 (2462637) | 2462637..2463662 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| LLY43_RS12025 (2463721) | 2463721..2464512 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| LLY43_RS12030 (2464558) | 2464558..2465649 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |