MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP085983 Location: 1255618..1266008 Organism: Salmonella enterica strain SZL 31 Replicon: chromosome
Accession: NZ_CP085983 Location: 1255618..1266008 Organism: Salmonella enterica strain SZL 31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJY15_RS06045 (1250696) | 1250696..1251076 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| LJY15_RS06050 (1251132) | 1251132..1253699 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LJY15_RS06055 (1253858) | 1253858..1254379 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| LJY15_RS06060 (1254550) | 1254550..1255206 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| LJY15_RS06065 (1255541) | 1255541..1255758 | + | 218 | Protein_1176 | IS5 family transposase ISEcl3 | Transposase |
| LJY15_RS06070 (1255831) | 1255831..1256358 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LJY15_RS06075 (1256355) | 1256355..1256645 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LJY15_RS06080 (1256915) | 1256915..1257093 | - | 179 | Protein_1179 | IS3 family transposase | - |
| LJY15_RS06085 (1257334) | 1257334..1257660 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| LJY15_RS06090 (1257933) | 1257933..1258280 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LJY15_RS06095 (1258265) | 1258265..1258714 | - | 450 | WP_000381612.1 | membrane protein | - |
| LJY15_RS06100 (1259146) | 1259146..1259589 | - | 444 | WP_023993678.1 | hypothetical protein | VF |
| LJY15_RS06105 (1260045) | 1260045..1260695 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| LJY15_RS06110 (1260692) | 1260692..1262380 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| LJY15_RS06115 (1262377) | 1262377..1263495 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| LJY15_RS06120 (1263520) | 1263520..1265577 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| LJY15_RS06125 (1265601) | 1265601..1266008 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| LJY15_RS06130 (1266005) | 1266005..1267300 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| LJY15_RS06135 (1267278) | 1267278..1267721 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| LJY15_RS06140 (1267721) | 1267721..1268731 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| LJY15_RS06145 (1268731) | 1268731..1269642 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| LJY15_RS06150 (1269632) | 1269632..1270306 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| LJY15_RS06155 (1270332) | 1270332..1270592 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |