MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81985 bp
Accession: NZ_CP085886 Location: 1..81985 Organism: Pseudomonas sp. HN2 Replicon: plasmid pHN2
Accession: NZ_CP085886 Location: 1..81985 Organism: Pseudomonas sp. HN2 Replicon: plasmid pHN2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIS66_RS27105 (LIS66_27105) | 1..426 | + | 426 | WP_227974554.1 | hypothetical protein | - |
| LIS66_RS27110 (LIS66_27110) | 510..770 | + | 261 | WP_227974555.1 | hypothetical protein | - |
| LIS66_RS27115 (LIS66_27115) | 1295..1585 | - | 291 | WP_227974556.1 | hypothetical protein | - |
| LIS66_RS27120 (LIS66_27120) | 1661..2314 | - | 654 | WP_227974557.1 | ParA family protein | - |
| LIS66_RS27125 (LIS66_27125) | 2411..2872 | - | 462 | WP_227974558.1 | hypothetical protein | - |
| LIS66_RS27130 (LIS66_27130) | 2900..3190 | - | 291 | WP_227974559.1 | hypothetical protein | - |
| LIS66_RS27135 (LIS66_27135) | 3515..4174 | - | 660 | WP_227974560.1 | LexA family transcriptional regulator | - |
| LIS66_RS27140 (LIS66_27140) | 4304..4567 | + | 264 | WP_227974561.1 | helix-turn-helix domain-containing protein | - |
| LIS66_RS27145 (LIS66_27145) | 4564..5157 | + | 594 | WP_227974562.1 | hypothetical protein | - |
| LIS66_RS27150 (LIS66_27150) | 5179..5652 | + | 474 | WP_227974563.1 | hypothetical protein | - |
| LIS66_RS27155 (LIS66_27155) | 5959..6285 | + | 327 | WP_227974564.1 | hypothetical protein | - |
| LIS66_RS27160 (LIS66_27160) | 6282..6554 | + | 273 | WP_227974565.1 | hypothetical protein | - |
| LIS66_RS27165 (LIS66_27165) | 6706..7971 | + | 1266 | WP_227974566.1 | site-specific integrase | - |
| LIS66_RS27170 (LIS66_27170) | 8012..8458 | + | 447 | WP_227974567.1 | hypothetical protein | - |
| LIS66_RS27175 (LIS66_27175) | 8689..9006 | + | 318 | WP_227974568.1 | phage holin, lambda family | - |
| LIS66_RS27180 (LIS66_27180) | 9128..9508 | + | 381 | WP_227974569.1 | hypothetical protein | - |
| LIS66_RS27185 (LIS66_27185) | 9527..10267 | + | 741 | WP_227974570.1 | hypothetical protein | - |
| LIS66_RS27190 (LIS66_27190) | 10448..11002 | + | 555 | WP_130901841.1 | terminase small subunit | - |
| LIS66_RS27195 (LIS66_27195) | 10965..13049 | + | 2085 | WP_227974571.1 | phage terminase large subunit family protein | - |
| LIS66_RS27200 (LIS66_27200) | 13040..13258 | + | 219 | WP_227974572.1 | primosomal replication protein PriB/PriC domain protein | - |
| LIS66_RS27205 (LIS66_27205) | 13255..14787 | + | 1533 | WP_227974573.1 | phage portal protein | - |
| LIS66_RS27210 (LIS66_27210) | 14726..16795 | + | 2070 | WP_227974574.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LIS66_RS27215 (LIS66_27215) | 16860..17174 | + | 315 | WP_227974575.1 | hypothetical protein | - |
| LIS66_RS27220 (LIS66_27220) | 17210..17557 | + | 348 | WP_227974576.1 | hypothetical protein | - |
| LIS66_RS27225 (LIS66_27225) | 17532..18044 | + | 513 | WP_227974577.1 | hypothetical protein | - |
| LIS66_RS27230 (LIS66_27230) | 18041..18616 | + | 576 | WP_227974578.1 | phage baseplate assembly protein V | - |
| LIS66_RS27235 (LIS66_27235) | 18672..18887 | + | 216 | WP_130901833.1 | hypothetical protein | - |
| LIS66_RS27240 (LIS66_27240) | 18893..19219 | + | 327 | WP_227974579.1 | GPW/gp25 family protein | - |
| LIS66_RS27245 (LIS66_27245) | 19216..20124 | + | 909 | WP_227974580.1 | baseplate J/gp47 family protein | - |
| LIS66_RS27250 (LIS66_27250) | 20099..20707 | + | 609 | WP_227974581.1 | phage tail protein I | - |
| LIS66_RS27255 (LIS66_27255) | 20700..22535 | + | 1836 | WP_227974582.1 | phage tail protein | - |
| LIS66_RS27260 (LIS66_27260) | 22532..23086 | + | 555 | WP_227974583.1 | DUF4376 domain-containing protein | - |
| LIS66_RS27265 (LIS66_27265) | 23190..24356 | + | 1167 | WP_227974584.1 | phage tail sheath family protein | - |
| LIS66_RS27270 (LIS66_27270) | 24369..24872 | + | 504 | WP_227974585.1 | phage major tail tube protein | - |
| LIS66_RS27275 (LIS66_27275) | 24884..25195 | + | 312 | WP_227974586.1 | phage tail assembly protein | - |
| LIS66_RS27280 (LIS66_27280) | 25342..27831 | + | 2490 | WP_227974587.1 | phage tail tape measure protein | - |
| LIS66_RS27285 (LIS66_27285) | 27844..28689 | + | 846 | WP_130901874.1 | phage tail protein | - |
| LIS66_RS27290 (LIS66_27290) | 28664..28870 | + | 207 | WP_095180626.1 | tail protein X | - |
| LIS66_RS27295 (LIS66_27295) | 28965..30014 | + | 1050 | WP_227974588.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LIS66_RS27300 (LIS66_27300) | 30072..30731 | + | 660 | WP_227974589.1 | glycoside hydrolase family 19 protein | - |
| LIS66_RS27305 (LIS66_27305) | 30713..31279 | + | 567 | WP_227974590.1 | lysis system i-spanin subunit Rz | - |
| LIS66_RS27310 (LIS66_27310) | 31658..32671 | + | 1014 | WP_227974591.1 | hypothetical protein | - |
| LIS66_RS27315 (LIS66_27315) | 33445..33831 | + | 387 | WP_227974592.1 | hypothetical protein | - |
| LIS66_RS27320 (LIS66_27320) | 34044..34370 | + | 327 | WP_227974593.1 | hypothetical protein | - |
| LIS66_RS27325 (LIS66_27325) | 34418..35887 | + | 1470 | WP_227974594.1 | hypothetical protein | - |
| LIS66_RS27330 (LIS66_27330) | 36031..36366 | + | 336 | WP_227974595.1 | hypothetical protein | - |
| LIS66_RS27335 (LIS66_27335) | 36468..36650 | + | 183 | WP_227974596.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LIS66_RS27340 (LIS66_27340) | 36682..37104 | + | 423 | WP_227974597.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LIS66_RS27345 (LIS66_27345) | 37104..37511 | + | 408 | WP_227974598.1 | S24 family peptidase | - |
| LIS66_RS27350 (LIS66_27350) | 37495..38031 | + | 537 | WP_227974599.1 | hypothetical protein | - |
| LIS66_RS27355 (LIS66_27355) | 38051..38362 | + | 312 | WP_227974600.1 | hypothetical protein | - |
| LIS66_RS27360 (LIS66_27360) | 38377..38811 | + | 435 | WP_227974601.1 | hypothetical protein | - |
| LIS66_RS27365 (LIS66_27365) | 38897..39094 | + | 198 | WP_227974602.1 | hypothetical protein | - |
| LIS66_RS27370 (LIS66_27370) | 39274..39546 | + | 273 | WP_227974603.1 | hypothetical protein | - |
| LIS66_RS27375 (LIS66_27375) | 39582..40214 | + | 633 | WP_227974604.1 | hypothetical protein | - |
| LIS66_RS27380 (LIS66_27380) | 40298..40693 | + | 396 | WP_227974606.1 | hypothetical protein | - |
| LIS66_RS27385 (LIS66_27385) | 40690..40938 | + | 249 | WP_227974607.1 | hypothetical protein | - |
| LIS66_RS27390 (LIS66_27390) | 40935..41249 | + | 315 | WP_227974608.1 | hypothetical protein | - |
| LIS66_RS27395 (LIS66_27395) | 41246..41671 | + | 426 | WP_227974554.1 | hypothetical protein | - |
| LIS66_RS27400 (LIS66_27400) | 41755..42015 | + | 261 | WP_227974555.1 | hypothetical protein | - |
| LIS66_RS27405 (LIS66_27405) | 42012..42266 | + | 255 | WP_130901858.1 | hypothetical protein | - |
| LIS66_RS27410 (LIS66_27410) | 42538..42828 | - | 291 | WP_227974556.1 | hypothetical protein | - |
| LIS66_RS27415 (LIS66_27415) | 42904..43557 | - | 654 | WP_227974557.1 | ParA family protein | - |
| LIS66_RS27420 (LIS66_27420) | 43654..44115 | - | 462 | WP_227974558.1 | hypothetical protein | - |
| LIS66_RS27425 (LIS66_27425) | 44143..44433 | - | 291 | WP_227974559.1 | hypothetical protein | - |
| LIS66_RS27430 (LIS66_27430) | 44758..45417 | - | 660 | WP_227974560.1 | LexA family transcriptional regulator | - |
| LIS66_RS27435 (LIS66_27435) | 45547..45810 | + | 264 | WP_227974561.1 | helix-turn-helix domain-containing protein | - |
| LIS66_RS27440 (LIS66_27440) | 45807..46400 | + | 594 | WP_227974562.1 | hypothetical protein | - |
| LIS66_RS27445 (LIS66_27445) | 46422..46895 | + | 474 | WP_227974563.1 | hypothetical protein | - |
| LIS66_RS27450 (LIS66_27450) | 47202..47528 | + | 327 | WP_227974564.1 | hypothetical protein | - |
| LIS66_RS27455 (LIS66_27455) | 47525..47797 | + | 273 | WP_227974565.1 | hypothetical protein | - |
| LIS66_RS27460 (LIS66_27460) | 47949..49214 | + | 1266 | WP_227974566.1 | site-specific integrase | - |
| LIS66_RS27465 (LIS66_27465) | 49255..49701 | + | 447 | WP_227974567.1 | hypothetical protein | - |
| LIS66_RS27470 (LIS66_27470) | 49932..50249 | + | 318 | WP_227974568.1 | phage holin, lambda family | - |
| LIS66_RS27475 (LIS66_27475) | 50371..50751 | + | 381 | WP_227974569.1 | hypothetical protein | - |
| LIS66_RS27480 (LIS66_27480) | 50770..51510 | + | 741 | WP_227974570.1 | hypothetical protein | - |
| LIS66_RS27485 (LIS66_27485) | 51691..52245 | + | 555 | WP_130901841.1 | terminase small subunit | - |
| LIS66_RS27490 (LIS66_27490) | 52208..54292 | + | 2085 | WP_227974571.1 | phage terminase large subunit family protein | - |
| LIS66_RS27495 (LIS66_27495) | 54283..54501 | + | 219 | WP_227974572.1 | primosomal replication protein PriB/PriC domain protein | - |
| LIS66_RS27500 (LIS66_27500) | 54498..56030 | + | 1533 | WP_227974573.1 | phage portal protein | - |
| LIS66_RS27505 (LIS66_27505) | 55969..58038 | + | 2070 | WP_227974574.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LIS66_RS27510 (LIS66_27510) | 58103..58417 | + | 315 | WP_227974575.1 | hypothetical protein | - |
| LIS66_RS27515 (LIS66_27515) | 58453..58800 | + | 348 | WP_227974576.1 | hypothetical protein | - |
| LIS66_RS27520 (LIS66_27520) | 58775..59287 | + | 513 | WP_227974577.1 | hypothetical protein | - |
| LIS66_RS27525 (LIS66_27525) | 59284..59859 | + | 576 | WP_227974578.1 | phage baseplate assembly protein V | - |
| LIS66_RS27530 (LIS66_27530) | 59915..60130 | + | 216 | WP_130901833.1 | hypothetical protein | - |
| LIS66_RS27535 (LIS66_27535) | 60136..60462 | + | 327 | WP_227974579.1 | GPW/gp25 family protein | - |
| LIS66_RS27540 (LIS66_27540) | 60459..61367 | + | 909 | WP_227974580.1 | baseplate J/gp47 family protein | - |
| LIS66_RS27545 (LIS66_27545) | 61342..61950 | + | 609 | WP_227974581.1 | phage tail protein I | - |
| LIS66_RS27550 (LIS66_27550) | 61943..63778 | + | 1836 | WP_227974582.1 | phage tail protein | - |
| LIS66_RS27555 (LIS66_27555) | 63775..64329 | + | 555 | WP_227974583.1 | DUF4376 domain-containing protein | - |
| LIS66_RS27560 (LIS66_27560) | 64433..65599 | + | 1167 | WP_227974584.1 | phage tail sheath family protein | - |
| LIS66_RS27565 (LIS66_27565) | 65612..66115 | + | 504 | WP_227974585.1 | phage major tail tube protein | - |
| LIS66_RS27570 (LIS66_27570) | 66127..66438 | + | 312 | WP_227974586.1 | phage tail assembly protein | - |
| LIS66_RS27575 (LIS66_27575) | 66585..69074 | + | 2490 | WP_227974587.1 | phage tail tape measure protein | - |
| LIS66_RS27580 (LIS66_27580) | 69087..69932 | + | 846 | WP_130901874.1 | phage tail protein | - |
| LIS66_RS27585 (LIS66_27585) | 69907..70113 | + | 207 | WP_095180626.1 | tail protein X | - |
| LIS66_RS27590 (LIS66_27590) | 70208..71257 | + | 1050 | WP_227974588.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LIS66_RS27595 (LIS66_27595) | 71315..71974 | + | 660 | WP_227974589.1 | glycoside hydrolase family 19 protein | - |
| LIS66_RS27600 (LIS66_27600) | 71956..72522 | + | 567 | WP_227974590.1 | lysis system i-spanin subunit Rz | - |
| LIS66_RS27605 (LIS66_27605) | 72901..73914 | + | 1014 | WP_227974591.1 | hypothetical protein | - |
| LIS66_RS27610 (LIS66_27610) | 74688..75074 | + | 387 | WP_227974592.1 | hypothetical protein | - |
| LIS66_RS27615 (LIS66_27615) | 75287..75613 | + | 327 | WP_227974593.1 | hypothetical protein | - |
| LIS66_RS27620 (LIS66_27620) | 75661..77130 | + | 1470 | WP_227974594.1 | hypothetical protein | - |
| LIS66_RS27625 (LIS66_27625) | 77274..77609 | + | 336 | WP_227974595.1 | hypothetical protein | - |
| LIS66_RS27630 (LIS66_27630) | 77711..77893 | + | 183 | WP_227974596.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LIS66_RS27635 (LIS66_27635) | 77925..78347 | + | 423 | WP_227974597.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LIS66_RS27640 (LIS66_27640) | 78347..78754 | + | 408 | WP_227974598.1 | S24 family peptidase | - |
| LIS66_RS27645 (LIS66_27645) | 78738..79274 | + | 537 | WP_227974599.1 | hypothetical protein | - |
| LIS66_RS27650 (LIS66_27650) | 79294..79605 | + | 312 | WP_227974600.1 | hypothetical protein | - |
| LIS66_RS27655 (LIS66_27655) | 79620..80054 | + | 435 | WP_227974601.1 | hypothetical protein | - |
| LIS66_RS27660 (LIS66_27660) | 80140..80337 | + | 198 | WP_227974602.1 | hypothetical protein | - |
| LIS66_RS27665 (LIS66_27665) | 80517..80789 | + | 273 | WP_227974603.1 | hypothetical protein | - |
| LIS66_RS27670 (LIS66_27670) | 80825..81457 | + | 633 | WP_227974604.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|