MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085823 Location: 1909061..1919671 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Venusaur Replicon: chromosome
Accession: NZ_CP085823 Location: 1909061..1919671 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Venusaur Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF47_RS09465 (1905007) | 1905007..1905462 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF47_RS09470 (1905604) | 1905604..1906833 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF47_RS09475 (1906864) | 1906864..1907136 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF47_RS09480 (1907258) | 1907258..1908106 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF47_RS09485 (1908316) | 1908316..1909074 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF47_RS09490 (1909061) | 1909061..1909573 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF47_RS09495 (1909717) | 1909717..1910793 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF47_RS09500 (1910790) | 1910790..1911533 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF47_RS09505 (1911574) | 1911574..1914057 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF47_RS09510 (1914177) | 1914177..1914758 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF47_RS09515 (1915477) | 1915477..1916109 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF47_RS09520 (1916156) | 1916156..1916692 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF47_RS09525 (1917500) | 1917500..1917898 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF47_RS09530 (1917898) | 1917898..1918125 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF47_RS09535 (1918334) | 1918334..1918585 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF47_RS09540 (1918865) | 1918865..1919671 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF47_RS09550 (1919956) | 1919956..1920714 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF47_RS09555 (1920979) | 1920979..1921524 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF47_RS09560 (1921600) | 1921600..1923117 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |