MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085822 Location: 4348716..4360071 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charmeleon Replicon: chromosome
Accession: NZ_CP085822 Location: 4348716..4360071 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charmeleon Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF58_RS21170 (4344162) | 4344162..4345260 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF58_RS21175 (4345270) | 4345270..4346787 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF58_RS21180 (4346863) | 4346863..4347408 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF58_RS21185 (4347673) | 4347673..4348431 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF58_RS21195 (4348716) | 4348716..4349522 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF58_RS21200 (4349802) | 4349802..4350053 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF58_RS21205 (4350262) | 4350262..4350489 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF58_RS21210 (4350489) | 4350489..4350887 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF58_RS21215 (4351695) | 4351695..4352231 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| LJF58_RS21220 (4352278) | 4352278..4352910 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF58_RS21225 (4353629) | 4353629..4354210 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| LJF58_RS21230 (4354330) | 4354330..4356813 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| LJF58_RS21235 (4356854) | 4356854..4357597 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| LJF58_RS21240 (4357594) | 4357594..4358670 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF58_RS21245 (4358814) | 4358814..4359326 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF58_RS21250 (4359313) | 4359313..4360071 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF58_RS21255 (4360281) | 4360281..4361129 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF58_RS21260 (4361251) | 4361251..4361523 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF58_RS21265 (4361554) | 4361554..4362783 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF58_RS21270 (4362925) | 4362925..4363380 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF58_RS21275 (4363484) | 4363484..4364347 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |