MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085821 Location: 3521808..3532418 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charizard Replicon: chromosome
Accession: NZ_CP085821 Location: 3521808..3532418 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charizard Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF63_RS17225 (3517754) | 3517754..3518209 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF63_RS17230 (3518351) | 3518351..3519580 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF63_RS17235 (3519611) | 3519611..3519883 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF63_RS17240 (3520005) | 3520005..3520853 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF63_RS17245 (3521063) | 3521063..3521821 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF63_RS17250 (3521808) | 3521808..3522320 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF63_RS17255 (3522464) | 3522464..3523540 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF63_RS17260 (3523537) | 3523537..3524280 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF63_RS17265 (3524321) | 3524321..3526804 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF63_RS17270 (3526924) | 3526924..3527505 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF63_RS17275 (3528224) | 3528224..3528856 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF63_RS17280 (3528903) | 3528903..3529439 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF63_RS17285 (3530247) | 3530247..3530645 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF63_RS17290 (3530645) | 3530645..3530872 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF63_RS17295 (3531081) | 3531081..3531332 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF63_RS17300 (3531612) | 3531612..3532418 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF63_RS17310 (3532703) | 3532703..3533461 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF63_RS17315 (3533726) | 3533726..3534271 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF63_RS17320 (3534347) | 3534347..3535864 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |