MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP085819 Location: 4353593..4365678 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Accession: NZ_CP085819 Location: 4353593..4365678 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF65_RS20965 (4349514) | 4349514..4350716 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| LJF65_RS20970 (4350729) | 4350729..4352180 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| LJF65_RS20975 (4352324) | 4352324..4353331 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| LJF65_RS20980 (4353590) | 4353590..4355056 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| LJF65_RS20985 (4355864) | 4355864..4356578 | + | 715 | Protein_4085 | helix-turn-helix domain-containing protein | - |
| LJF65_RS20990 (4356634) | 4356634..4357542 | - | 909 | WP_077918335.1 | hypothetical protein | - |
| LJF65_RS20995 (4357685) | 4357685..4358017 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| LJF65_RS21000 (4358007) | 4358007..4358222 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| LJF65_RS21005 (4358374) | 4358374..4358622 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LJF65_RS21010 (4358612) | 4358612..4358896 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LJF65_RS21015 (4359067) | 4359067..4359456 | + | 390 | WP_000194089.1 | RidA family protein | - |
| LJF65_RS21020 (4359508) | 4359508..4360587 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| LJF65_RS21025 (4360780) | 4360780..4361268 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LJF65_RS21030 (4361313) | 4361313..4362821 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| LJF65_RS21035 (4362811) | 4362811..4364052 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| LJF65_RS21040 (4364122) | 4364122..4365678 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| LJF65_RS21045 (4365855) | 4365855..4367141 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| LJF65_RS21050 (4367116) | 4367116..4368141 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| LJF65_RS21055 (4368200) | 4368200..4368991 | - | 792 | WP_077953700.1 | FadR/GntR family transcriptional regulator | - |
| LJF65_RS21060 (4369037) | 4369037..4370128 | - | 1092 | WP_044815620.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |