MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP085819 Location: 2889199..2899625 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Accession: NZ_CP085819 Location: 2889199..2899625 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF65_RS13635 (2884312) | 2884312..2884692 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| LJF65_RS13640 (2884748) | 2884748..2887315 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LJF65_RS13645 (2887474) | 2887474..2887995 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| LJF65_RS13650 (2888167) | 2888167..2888823 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LJF65_RS13655 (2889170) | 2889170..2889375 | + | 206 | Protein_2650 | IS5 family transposase ISEcl3 | Transposase |
| LJF65_RS13660 (2889448) | 2889448..2889975 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LJF65_RS13665 (2889972) | 2889972..2890262 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LJF65_RS13670 (2890532) | 2890532..2890710 | - | 179 | Protein_2653 | IS3 family transposase | - |
| LJF65_RS13675 (2890951) | 2890951..2891277 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| LJF65_RS13680 (2891550) | 2891550..2891897 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LJF65_RS13685 (2891882) | 2891882..2892331 | - | 450 | WP_000381610.1 | membrane protein | - |
| LJF65_RS13690 (2892762) | 2892762..2893205 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| LJF65_RS13695 (2893662) | 2893662..2894312 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| LJF65_RS13700 (2894309) | 2894309..2895997 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| LJF65_RS13705 (2895994) | 2895994..2897112 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| LJF65_RS13710 (2897137) | 2897137..2899194 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| LJF65_RS13715 (2899218) | 2899218..2899625 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| LJF65_RS13720 (2899622) | 2899622..2900917 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| LJF65_RS13725 (2900895) | 2900895..2901338 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| LJF65_RS13730 (2901338) | 2901338..2902348 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| LJF65_RS13735 (2902348) | 2902348..2903259 | + | 912 | WP_070130114.1 | SPI-1 type III secretion system protein SpaO | - |
| LJF65_RS13740 (2903249) | 2903249..2903923 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| LJF65_RS13745 (2903949) | 2903949..2904209 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |