MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085805 Location: 1143401..1154756 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Azumarill Replicon: chromosome
Accession: NZ_CP085805 Location: 1143401..1154756 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Azumarill Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF48_RS05470 (1138847) | 1138847..1139945 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF48_RS05475 (1139955) | 1139955..1141472 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF48_RS05480 (1141548) | 1141548..1142093 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF48_RS05485 (1142358) | 1142358..1143116 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF48_RS05495 (1143401) | 1143401..1144207 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF48_RS05500 (1144487) | 1144487..1144738 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF48_RS05505 (1144947) | 1144947..1145174 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF48_RS05510 (1145174) | 1145174..1145572 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF48_RS05515 (1146380) | 1146380..1146916 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| LJF48_RS05520 (1146963) | 1146963..1147595 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF48_RS05525 (1148314) | 1148314..1148895 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| LJF48_RS05530 (1149015) | 1149015..1151498 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| LJF48_RS05535 (1151539) | 1151539..1152282 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| LJF48_RS05540 (1152279) | 1152279..1153355 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF48_RS05545 (1153499) | 1153499..1154011 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF48_RS05550 (1153998) | 1153998..1154756 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF48_RS05555 (1154966) | 1154966..1155814 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF48_RS05560 (1155936) | 1155936..1156208 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF48_RS05565 (1156239) | 1156239..1157468 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF48_RS05570 (1157610) | 1157610..1158065 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF48_RS05575 (1158169) | 1158169..1159032 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |