MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085803 Location: 3815985..3826595 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Glaceon Replicon: chromosome
Accession: NZ_CP085803 Location: 3815985..3826595 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Glaceon Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF50_RS18640 (3811931) | 3811931..3812386 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF50_RS18645 (3812528) | 3812528..3813757 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF50_RS18650 (3813788) | 3813788..3814060 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF50_RS18655 (3814182) | 3814182..3815030 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF50_RS18660 (3815240) | 3815240..3815998 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF50_RS18665 (3815985) | 3815985..3816497 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF50_RS18670 (3816641) | 3816641..3817717 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF50_RS18675 (3817714) | 3817714..3818457 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| LJF50_RS18680 (3818498) | 3818498..3820981 | - | 2484 | WP_000705505.1 | hypothetical protein | VF |
| LJF50_RS18685 (3821101) | 3821101..3821682 | - | 582 | WP_001244651.1 | hypothetical protein | VF |
| LJF50_RS18690 (3822401) | 3822401..3823033 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF50_RS18695 (3823080) | 3823080..3823616 | - | 537 | WP_001038502.1 | hypothetical protein | VF |
| LJF50_RS18700 (3824424) | 3824424..3824822 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF50_RS18705 (3824822) | 3824822..3825049 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF50_RS18710 (3825258) | 3825258..3825509 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF50_RS18715 (3825789) | 3825789..3826595 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF50_RS18725 (3826880) | 3826880..3827638 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF50_RS18730 (3827903) | 3827903..3828448 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF50_RS18735 (3828524) | 3828524..3830041 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |