MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085799 Location: 4381015..4392370 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Swellow Replicon: chromosome
Accession: NZ_CP085799 Location: 4381015..4392370 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Swellow Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF54_RS21420 (4376461) | 4376461..4377559 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF54_RS21425 (4377569) | 4377569..4379086 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF54_RS21430 (4379162) | 4379162..4379707 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF54_RS21435 (4379972) | 4379972..4380730 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF54_RS21445 (4381015) | 4381015..4381821 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF54_RS21450 (4382101) | 4382101..4382352 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF54_RS21455 (4382561) | 4382561..4382788 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF54_RS21460 (4382788) | 4382788..4383186 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF54_RS21465 (4383994) | 4383994..4384530 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF54_RS21470 (4384577) | 4384577..4385209 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF54_RS21475 (4385928) | 4385928..4386509 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF54_RS21480 (4386629) | 4386629..4389112 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF54_RS21485 (4389153) | 4389153..4389896 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF54_RS21490 (4389893) | 4389893..4390969 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF54_RS21495 (4391113) | 4391113..4391625 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF54_RS21500 (4391612) | 4391612..4392370 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF54_RS21505 (4392580) | 4392580..4393440 | - | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| LJF54_RS21510 (4393562) | 4393562..4393834 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF54_RS21515 (4393865) | 4393865..4395094 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF54_RS21520 (4395236) | 4395236..4395691 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF54_RS21525 (4395795) | 4395795..4396658 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |