MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085797 Location: 1894183..1905538 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latios Replicon: chromosome
Accession: NZ_CP085797 Location: 1894183..1905538 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latios Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF56_RS08915 (1889629) | 1889629..1890727 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF56_RS08920 (1890737) | 1890737..1892254 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF56_RS08925 (1892330) | 1892330..1892875 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF56_RS08930 (1893140) | 1893140..1893898 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF56_RS08940 (1894183) | 1894183..1894989 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF56_RS08945 (1895269) | 1895269..1895520 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF56_RS08950 (1895729) | 1895729..1895956 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF56_RS08955 (1895956) | 1895956..1896354 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF56_RS08960 (1897162) | 1897162..1897698 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF56_RS08965 (1897745) | 1897745..1898377 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF56_RS08970 (1899096) | 1899096..1899677 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF56_RS08975 (1899797) | 1899797..1902280 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF56_RS08980 (1902321) | 1902321..1903064 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF56_RS08985 (1903061) | 1903061..1904137 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF56_RS08990 (1904281) | 1904281..1904793 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF56_RS08995 (1904780) | 1904780..1905538 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF56_RS09000 (1905748) | 1905748..1906596 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF56_RS09005 (1906718) | 1906718..1906990 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF56_RS09010 (1907021) | 1907021..1908250 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF56_RS09015 (1908392) | 1908392..1908847 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF56_RS09020 (1908951) | 1908951..1909814 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |