MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085796 Location: 4305162..4315772 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Froakie Replicon: chromosome
Accession: NZ_CP085796 Location: 4305162..4315772 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Froakie Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF57_RS20865 (4301108) | 4301108..4301563 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF57_RS20870 (4301705) | 4301705..4302934 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF57_RS20875 (4302965) | 4302965..4303237 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF57_RS20880 (4303359) | 4303359..4304207 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF57_RS20885 (4304417) | 4304417..4305175 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF57_RS20890 (4305162) | 4305162..4305674 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF57_RS20895 (4305818) | 4305818..4306894 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF57_RS20900 (4306891) | 4306891..4307634 | - | 744 | WP_000798504.1 | fimbrial biogenesis chaperone StdC | - |
| LJF57_RS20905 (4307675) | 4307675..4310158 | - | 2484 | WP_000705505.1 | fimbrial outer membrane usher protein StdB | - |
| LJF57_RS20910 (4310278) | 4310278..4310859 | - | 582 | WP_001244651.1 | fimbrial protein | - |
| LJF57_RS20915 (4311578) | 4311578..4312210 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF57_RS20920 (4312257) | 4312257..4312793 | - | 537 | WP_001038502.1 | STM3031 family outer membrane protein | - |
| LJF57_RS20925 (4313601) | 4313601..4313999 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF57_RS20930 (4313999) | 4313999..4314226 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF57_RS20935 (4314435) | 4314435..4314686 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF57_RS20940 (4314966) | 4314966..4315772 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF57_RS20950 (4316057) | 4316057..4316815 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF57_RS20955 (4317080) | 4317080..4317625 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF57_RS20960 (4317701) | 4317701..4319218 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |