MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085794 Location: 325976..336586 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Greninja Replicon: chromosome
Accession: NZ_CP085794 Location: 325976..336586 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Greninja Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF60_RS01485 (321922) | 321922..322377 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF60_RS01490 (322519) | 322519..323748 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF60_RS01495 (323779) | 323779..324051 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF60_RS01500 (324173) | 324173..325021 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF60_RS01505 (325231) | 325231..325989 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF60_RS01510 (325976) | 325976..326488 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF60_RS01515 (326632) | 326632..327708 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF60_RS01520 (327705) | 327705..328448 | - | 744 | WP_227786880.1 | Chaperone protein PapD | VF |
| LJF60_RS01525 (328489) | 328489..330972 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF60_RS01530 (331092) | 331092..331673 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF60_RS01535 (332392) | 332392..333024 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF60_RS01540 (333071) | 333071..333607 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF60_RS01545 (334415) | 334415..334813 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF60_RS01550 (334813) | 334813..335040 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF60_RS01555 (335249) | 335249..335500 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF60_RS01560 (335780) | 335780..336586 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF60_RS01570 (336871) | 336871..337629 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF60_RS01575 (337894) | 337894..338439 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF60_RS01580 (338515) | 338515..340032 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |