MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085793 Location: 3723731..3734341 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Poochyena Replicon: chromosome
Accession: NZ_CP085793 Location: 3723731..3734341 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Poochyena Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF61_RS18145 (3719671) | 3719671..3720126 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF61_RS18150 (3720268) | 3720268..3721497 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF61_RS18155 (3721528) | 3721528..3721800 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF61_RS18160 (3721922) | 3721922..3722776 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| LJF61_RS18165 (3722986) | 3722986..3723744 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF61_RS18170 (3723731) | 3723731..3724243 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF61_RS18175 (3724387) | 3724387..3725463 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF61_RS18180 (3725460) | 3725460..3726203 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF61_RS18185 (3726244) | 3726244..3728727 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF61_RS18190 (3728847) | 3728847..3729428 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF61_RS18195 (3730147) | 3730147..3730779 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF61_RS18200 (3730826) | 3730826..3731362 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF61_RS18205 (3732170) | 3732170..3732568 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF61_RS18210 (3732568) | 3732568..3732795 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF61_RS18215 (3733004) | 3733004..3733255 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF61_RS18220 (3733535) | 3733535..3734341 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF61_RS18230 (3734626) | 3734626..3735384 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF61_RS18235 (3735649) | 3735649..3736194 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF61_RS18240 (3736270) | 3736270..3737787 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |