MGE detailed information
MGE type: Prophage MGE length: 24853 bp
Accession: NZ_CP085699 Location: 2124284..2149136 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Accession: NZ_CP085699 Location: 2124284..2149136 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN59_RS10420 () | 2120385..2122196 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| LJN59_RS10425 () | 2122234..2122875 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJN59_RS10430 () | 2122975..2124153 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJN59_RS10435 () | 2124284..2124574 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJN59_RS10440 () | 2124642..2124995 | + | 354 | WP_001042119.1 | protein YebF | - |
| LJN59_RS10445 () | 2125089..2125748 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LJN59_RS10450 () | 2125961..2128012 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| LJN59_RS10455 () | 2128047..2128745 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| LJN59_RS10460 () | 2128769..2129425 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| LJN59_RS10465 () | 2129533..2129763 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJN59_RS10470 () | 2129901..2130275 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJN59_RS10475 () | 2130276..2131151 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| LJN59_RS10480 () | 2131168..2131521 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2131621..2131766 | - | 146 | - | - | Antitoxin Detail |
| - | 2131661..2131764 | + | 104 | - | - | Toxin Detail |
| LJN59_RS10485 () | 2131895..2132818 | - | 924 | Protein_2052 | hypothetical protein ; Integrase | Integrase |
| LJN59_RS10490 () | 2133082..2133543 | - | 462 | Protein_2053 | DNA breaking-rejoining protein | - |
| LJN59_RS10495 () | 2133532..2133723 | + | 192 | Protein_2054 | glycoside hydrolase family 19 protein | - |
| LJN59_RS10500 () | 2133777..2134310 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| LJN59_RS10505 () | 2134567..2134734 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJN59_RS10510 () | 2134799..2134987 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| LJN59_RS10515 () | 2135042..2135302 | + | 261 | Protein_2058 | DUF1441 family protein | - |
| LJN59_RS10520 () | 2135517..2135861 | + | 345 | Protein_2059 | macro domain-containing protein | - |
| LJN59_RS10525 () | 2135871..2136341 | + | 471 | Protein_2060 | tail fiber assembly protein | - |
| LJN59_RS10530 () | 2136438..2136638 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| LJN59_RS10535 () | 2137028..2137208 | - | 181 | Protein_2062 | IS3 family transposase | - |
| LJN59_RS10540 () | 2137199..2137300 | + | 102 | Protein_2063 | arsenic transporter | - |
| LJN59_RS10545 () | 2137922..2138154 | + | 233 | Protein_2064 | helix-turn-helix domain-containing protein | - |
| LJN59_RS10550 () | 2138481..2139095 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| LJN59_RS10555 () | 2139105..2139263 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJN59_RS10560 () | 2139396..2140310 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| LJN59_RS10565 () | 2141623..2142045 | - | 423 | Protein_2068 | putative ABC transporter ATP-binding protein ; Integrase | Integrase |
| LJN59_RS10570 () | 2142115..2143309 | + | 1195 | Protein_2069 | IS256 family transposase IS285 | Transposase |
| LJN59_RS10575 () | 2143455..2143595 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| LJN59_RS10580 () | 2143761..2144030 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| LJN59_RS10585 () | 2144400..2144819 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| LJN59_RS10590 () | 2145207..2145683 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJN59_RS10595 () | 2146013..2146408 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJN59_RS10600 () | 2147091..2147813 | + | 723 | WP_000182072.1 | Peptidoglycan glycosyltransferase MrdB | VF |
| LJN59_RS10605 () | 2148098..2148262 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJN59_RS10610 () | 2148486..2149136 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| LJN59_RS10615 () | 2149155..2149346 | - | 192 | WP_000457836.1 | YebW family protein | - |
| LJN59_RS10620 () | 2149457..2149693 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJN59_RS10625 () | 2149811..2151250 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJN59_RS10630 () | 2151328..2153961 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 |