MGE detailed information
MGE type: Prophage MGE length: 15367 bp
Accession: NZ_CP085082 Location: 782014..797380 Organism: Pseudomonas aeruginosa strain PAO1-Holloway Replicon: chromosome
Accession: NZ_CP085082 Location: 782014..797380 Organism: Pseudomonas aeruginosa strain PAO1-Holloway Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO20_RS03630 (LIO20_03625) | 778094..778993 | - | 900 | WP_003112710.1 | alpha-1,6-rhamnosyltransferase | - |
| LIO20_RS03635 (LIO20_03630) | 779248..779886 | - | 639 | WP_003112709.1 | type B-4 chloramphenicol O-acetyltransferase CatB7 | - |
| LIO20_RS03640 (LIO20_03635) | 779979..780758 | - | 780 | WP_010793844.1 | toxA transcriptional regulator ToxR | - |
| LIO20_RS03645 (LIO20_03640) | 781044..781898 | - | 855 | WP_003112707.1 | LysR family transcriptional regulator | - |
| LIO20_RS03650 (LIO20_03645) | 782014..782310 | + | 297 | WP_003085421.1 | putative quinol monooxygenase | - |
| LIO20_RS03655 (LIO20_03650) | 782355..782750 | + | 396 | WP_003112706.1 | lactoylglutathione lyase | - |
| LIO20_RS03660 (LIO20_03655) | 782794..783300 | - | 507 | WP_003112705.1 | N-acetyltransferase | - |
| LIO20_RS03665 (LIO20_03660) | 783361..783618 | - | 258 | WP_003085431.1 | YjhX family toxin | - |
| LIO20_RS03670 (LIO20_03665) | 783958..784251 | + | 294 | WP_003141121.1 | DUF2845 domain-containing protein | - |
| LIO20_RS03675 (LIO20_03670) | 784483..784959 | + | 477 | WP_010895516.1 | hypothetical protein | - |
| LIO20_RS03680 (LIO20_03675) | 785751..786707 | + | 957 | WP_003112701.1 | reverse transcriptase family protein | - |
| LIO20_RS03685 (LIO20_03680) | 786710..788035 | + | 1326 | WP_003112700.1 | AAA family ATPase | - |
| LIO20_RS03690 (LIO20_03685) | 788324..788590 | - | 267 | WP_052158592.1 | hypothetical protein | - |
| LIO20_RS03695 (LIO20_03690) | 788709..788924 | + | 216 | WP_019372529.1 | hypothetical protein | - |
| LIO20_RS03700 (LIO20_03695) | 789142..789432 | + | 291 | WP_010895517.1 | DUF5447 family protein | - |
| LIO20_RS03705 (LIO20_03700) | 789948..790382 | + | 435 | WP_003115132.1 | phage destabilizing protein | - |
| LIO20_RS03710 (LIO20_03705) | 790504..790755 | + | 252 | WP_003115979.1 | hypothetical protein | - |
| LIO20_RS03715 (LIO20_03710) | 790768..791016 | + | 249 | WP_003125072.1 | major capsid protein | - |
| LIO20_RS03720 (LIO20_03715) | 791152..792414 | + | 1263 | WP_010895519.1 | phage coat protein A | - |
| LIO20_RS03725 (LIO20_03720) | 792419..792775 | + | 357 | WP_003114150.1 | DUF2523 family protein | - |
| LIO20_RS03730 (LIO20_03725) | 792779..794053 | + | 1275 | WP_010895520.1 | hypothetical protein | VF |
| LIO20_RS03735 (LIO20_03730) | 794283..795575 | + | 1293 | WP_003115206.1 | hypothetical protein | - |
| LIO20_RS03740 (LIO20_03735) | 795575..796558 | + | 984 | WP_003114154.1 | IS91 family transposase ISCARN110 | Transposase |
| LIO20_RS03745 (LIO20_03740) | 796772..797023 | + | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LIO20_RS03750 (LIO20_03745) | 797033..797380 | + | 348 | WP_003114156.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LIO20_RS03760 (LIO20_03755) | 797707..798609 | - | 903 | WP_003114157.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| LIO20_RS03765 (LIO20_03760) | 799061..799798 | - | 738 | WP_003114158.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| LIO20_RS03770 (LIO20_03765) | 799878..800921 | - | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| LIO20_RS03775 (LIO20_03770) | 801057..801749 | - | 693 | WP_003114159.1 | 16S rRNA pseudouridine(516) synthase | - |
| LIO20_RS03780 (LIO20_03775) | 801749..802021 | - | 273 | WP_010895521.1 | cysteine-rich CWC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas aeruginosa PAO1 | Prophage | TA10100 | NC_002516 | 783009..797598 | 0.001 |