MGE detailed information
MGE type: Mobilizable plasmid MGE length: 56811 bp
Accession: NZ_CP085077 Location: 1..56811 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid unnamed1
Accession: NZ_CP085077 Location: 1..56811 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS25360 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| LH372_RS25365 (1989) | 1989..2273 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LH372_RS25370 (2273) | 2273..2548 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LH372_RS25375 (2892) | 2892..2963 | + | 72 | Protein_3 | hypothetical protein | - |
| LH372_RS25380 (3091) | 3091..3693 | - | 603 | WP_105457299.1 | ProQ/FINO family protein | - |
| LH372_RS25385 (4047) | 4047..5393 | + | 1347 | WP_069192007.1 | protein YagA | - |
| LH372_RS25390 (5672) | 5672..7552 | + | 1881 | WP_106509577.1 | colicin Ia central receptor-binding domain-containing protein | - |
| LH372_RS25395 (7570) | 7570..7917 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| LH372_RS25400 (8036) | 8036..8383 | + | 348 | WP_000142449.1 | DUF6404 family protein | - |
| LH372_RS25405 (8401) | 8401..8991 | - | 591 | WP_106509576.1 | hypothetical protein | - |
| LH372_RS25410 (8991) | 8991..9248 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| LH372_RS25415 (9816) | 9816..10229 | + | 414 | WP_106509575.1 | hypothetical protein | - |
| LH372_RS25420 (10231) | 10231..11016 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| LH372_RS25425 (11600) | 11600..12232 | + | 633 | WP_000312331.1 | ParA family protein | - |
| LH372_RS25430 (12232) | 12232..12606 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| LH372_RS25435 (12846) | 12846..13820 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| LH372_RS25440 (13824) | 13824..14216 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| LH372_RS25445 (14897) | 14897..15799 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| LH372_RS25450 (15796) | 15796..16107 | + | 312 | WP_032141194.1 | hypothetical protein | - |
| LH372_RS25455 (16183) | 16183..16866 | + | 684 | WP_106509581.1 | DNA methylase | - |
| LH372_RS25460 (16867) | 16867..17088 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| LH372_RS25465 (17069) | 17069..17535 | + | 467 | Protein_21 | DUF1380 domain-containing protein | - |
| LH372_RS25470 (17586) | 17586..18356 | + | 771 | WP_069896314.1 | hypothetical protein | - |
| LH372_RS25475 (18774) | 18774..19199 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| LH372_RS25480 (19246) | 19246..19668 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| LH372_RS25485 (19665) | 19665..19856 | + | 192 | WP_106509580.1 | hypothetical protein | - |
| LH372_RS25490 (19927) | 19927..20241 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| LH372_RS25495 (21277) | 21277..22998 | + | 1722 | WP_226907402.1 | group II intron reverse transcriptase/maturase | - |
| LH372_RS25500 (23050) | 23050..23789 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| LH372_RS25505 (24462) | 24462..25970 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| LH372_RS25510 (26060) | 26060..26533 | + | 474 | Protein_30 | IS3 family transposase IS629 | Transposase |
| LH372_RS25515 (26911) | 26911..27396 | + | 486 | WP_031222835.1 | single-stranded DNA-binding protein | - |
| LH372_RS25520 (27454) | 27454..27687 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| LH372_RS25525 (27746) | 27746..29704 | + | 1959 | WP_001145480.1 | ParB/RepB/Spo0J family partition protein | - |
| LH372_RS25530 (29759) | 29759..30193 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| LH372_RS25535 (30190) | 30190..30909 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| LH372_RS25540 (30906) | 30906..31502 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| LH372_RS25545 (31965) | 31965..32465 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| LH372_RS25550 (33194) | 33194..33628 | + | 435 | WP_000218864.1 | hypothetical protein | - |
| LH372_RS25555 (33722) | 33722..33988 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| LH372_RS25560 (34053) | 34053..34967 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| LH372_RS25565 (34967) | 34967..35212 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| LH372_RS25570 (35243) | 35243..35494 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| LH372_RS25575 (36076) | 36076..36924 | + | 849 | WP_106509567.1 | DUF4942 domain-containing protein | - |
| LH372_RS25580 (37010) | 37010..37345 | - | 336 | WP_000157100.1 | hypothetical protein | - |
| LH372_RS25585 (37579) | 37579..37911 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| LH372_RS25590 (37922) | 37922..40621 | + | 2700 | WP_106509568.1 | Protein TraI | Relaxase |
| LH372_RS25595 (40658) | 40658..42949 | - | 2292 | WP_106509569.1 | F-type conjugative transfer protein TrbC | - |
| LH372_RS25600 (42942) | 42942..44012 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| LH372_RS25605 (44031) | 44031..45239 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| LH372_RS25610 (45546) | 45546..46328 | - | 783 | WP_023063753.1 | protein FinQ | - |
| LH372_RS25615 (46524) | 46524..46841 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| LH372_RS25620 (46838) | 46838..47371 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| LH372_RS25625 (47465) | 47465..48610 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| LH372_RS25635 (49815) | 49815..49913 | + | 99 | Protein_55 | ethanolamine utilization protein EutE | - |
| LH372_RS25640 (49985) | 49985..50194 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| LH372_RS25645 (50586) | 50586..50762 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| LH372_RS25650 (50827) | 50827..51123 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| LH372_RS25655 (51423) | 51423..51674 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| LH372_RS25660 (51746) | 51746..51898 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | - |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | - |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | - |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | - |
| LH372_RS25665 (52219) | 52219..52593 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| LH372_RS25670 (52746) | 52746..53903 | + | 1158 | Protein_62 | IS1380 family transposase ISEcp1 | Transposase |
| LH372_RS25675 (53959) | 53959..54656 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| LH372_RS25680 (54667) | 54667..54975 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| LH372_RS25685 (55417) | 55417..55704 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| LH372_RS25690 (55742) | 55742..55900 | - | 159 | Protein_66 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|