MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 128813 bp
Accession: NZ_CP084963 Location: 1..128813 Organism: Sulfitobacter pontiacus strain DSM 110277 Replicon: plasmid pDSM110277_d
Accession: NZ_CP084963 Location: 1..128813 Organism: Sulfitobacter pontiacus strain DSM 110277 Replicon: plasmid pDSM110277_d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM110277_RS17885 (DSM110277_03596) | 1..1356 | + | 1356 | WP_243252153.1 | ParA family protein | - |
| DSM110277_RS17890 (DSM110277_03597) | 1353..2375 | + | 1023 | WP_092765122.1 | ParB N-terminal domain-containing protein | - |
| DSM110277_RS17895 (DSM110277_03598) | 2603..3883 | + | 1281 | WP_243252155.1 | plasmid replication protein RepC | - |
| DSM110277_RS17900 (DSM110277_03599) | 4274..5908 | + | 1635 | WP_028288640.1 | Mu transposase C-terminal domain-containing protein | - |
| DSM110277_RS17905 (DSM110277_03600) | 5868..6791 | + | 924 | WP_245897677.1 | TniB family NTP-binding protein | - |
| DSM110277_RS17910 (DSM110277_03601) | 6728..7579 | + | 852 | WP_207186718.1 | TniQ family protein | - |
| DSM110277_RS17915 (DSM110277_03602) | 7877..8110 | - | 234 | WP_009573530.1 | IS110 family transposase ISAtu7 | Transposase |
| DSM110277_RS17920 | 8360..8539 | + | 180 | Protein_7 | IS6 family transposase ISPko6 | Transposase |
| DSM110277_RS17925 (DSM110277_03603) | 8638..9078 | - | 441 | WP_279289803.1 | LysR substrate-binding domain-containing protein | - |
| DSM110277_RS17930 (DSM110277_03604) | 9071..10456 | - | 1386 | WP_243252157.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| DSM110277_RS17935 (DSM110277_03605) | 10479..11060 | - | 582 | WP_243252158.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DSM110277_RS17940 (DSM110277_03606) | 11181..11840 | - | 660 | WP_243252159.1 | plasmid pRiA4b ORF-3 family protein | - |
| DSM110277_RS17945 (DSM110277_03607) | 11934..12326 | + | 393 | WP_243252161.1 | DUF4976 domain-containing protein | - |
| DSM110277_RS17950 (DSM110277_03608) | 12473..13591 | - | 1119 | WP_243252162.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| DSM110277_RS17955 (DSM110277_03609) | 13591..14349 | - | 759 | WP_243252164.1 | tyrosine-protein phosphatase | - |
| DSM110277_RS17960 (DSM110277_03610) | 14349..15209 | - | 861 | WP_243252166.1 | carbohydrate ABC transporter permease | - |
| DSM110277_RS17965 (DSM110277_03611) | 15199..16137 | - | 939 | WP_243252172.1 | sugar ABC transporter permease | - |
| DSM110277_RS17970 (DSM110277_03612) | 16196..17497 | - | 1302 | WP_243252173.1 | ABC transporter substrate-binding protein | - |
| DSM110277_RS17975 (DSM110277_03613) | 17568..18440 | - | 873 | WP_243252174.1 | metallophosphoesterase | - |
| DSM110277_RS17980 (DSM110277_03614) | 18579..18896 | + | 318 | WP_243252176.1 | TetR/AcrR family transcriptional regulator | - |
| DSM110277_RS17985 (DSM110277_03615) | 18999..20498 | + | 1500 | WP_243252214.1 | IS21 family transposase ISPve1 | Transposase |
| DSM110277_RS17990 (DSM110277_03616) | 20495..21259 | + | 765 | WP_243252177.1 | IS21 family transposase ISPve1 | Transposase |
| DSM110277_RS17995 (DSM110277_03617) | 21501..23135 | + | 1635 | WP_028288640.1 | Mu transposase C-terminal domain-containing protein | - |
| DSM110277_RS18000 (DSM110277_03618) | 23095..24018 | + | 924 | WP_245897677.1 | TniB family NTP-binding protein | - |
| DSM110277_RS18005 (DSM110277_03619) | 23955..24806 | + | 852 | WP_207186718.1 | TniQ family protein | - |
| DSM110277_RS18010 (DSM110277_03620) | 24995..25465 | + | 471 | WP_243252178.1 | hypothetical protein | - |
| DSM110277_RS18015 (DSM110277_03621) | 25506..26444 | + | 939 | WP_243252179.1 | zincin-like metallopeptidase domain-containing protein | - |
| DSM110277_RS18020 (DSM110277_03622) | 26468..26677 | + | 210 | WP_243252181.1 | DUF6330 family protein | - |
| DSM110277_RS18025 (DSM110277_03623) | 26766..27155 | + | 390 | WP_243252182.1 | DUF3768 domain-containing protein | - |
| DSM110277_RS18030 (DSM110277_03624) | 27312..29294 | + | 1983 | WP_243252183.1 | ParB/RepB/Spo0J family partition protein | - |
| DSM110277_RS18035 (DSM110277_03625) | 29373..29966 | + | 594 | WP_132998379.1 | regulator | - |
| DSM110277_RS18040 (DSM110277_03626) | 29966..30622 | + | 657 | WP_132998378.1 | hypothetical protein | - |
| DSM110277_RS18045 (DSM110277_03627) | 30727..31026 | + | 300 | WP_044353023.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DSM110277_RS18050 (DSM110277_03628) | 31013..31288 | + | 276 | WP_243252184.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DSM110277_RS18055 (DSM110277_03629) | 31395..35657 | + | 4263 | WP_243252185.1 | strawberry notch family protein | - |
| DSM110277_RS18060 (DSM110277_03630) | 35779..36165 | + | 387 | WP_132998375.1 | hypothetical protein | - |
| DSM110277_RS18065 (DSM110277_03631) | 36167..36628 | + | 462 | WP_132998374.1 | hypothetical protein | - |
| DSM110277_RS18070 (DSM110277_03632) | 36729..37031 | + | 303 | WP_132998373.1 | hypothetical protein | - |
| DSM110277_RS18075 (DSM110277_03633) | 37156..37884 | + | 729 | WP_132998372.1 | DUF736 family protein | - |
| DSM110277_RS18080 (DSM110277_03634) | 38160..39581 | - | 1422 | WP_132998371.1 | DUF2235 domain-containing protein | - |
| DSM110277_RS18085 (DSM110277_03635) | 39585..40193 | - | 609 | WP_132998370.1 | SLATT domain-containing protein | - |
| DSM110277_RS18090 (DSM110277_03636) | 40174..41499 | - | 1326 | WP_132998369.1 | nucleotidyltransferase | - |
| DSM110277_RS18095 (DSM110277_03637) | 41678..42739 | + | 1062 | WP_132998368.1 | XRE family transcriptional regulator | - |
| DSM110277_RS18100 | 42747..43232 | + | 486 | WP_132998367.1 | hypothetical protein | - |
| DSM110277_RS18105 (DSM110277_03639) | 43826..44755 | + | 930 | WP_243252186.1 | DUF2493 domain-containing protein | - |
| DSM110277_RS18110 (DSM110277_03640) | 45286..45492 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| DSM110277_RS18115 (DSM110277_03641) | 46057..46650 | + | 594 | WP_243252187.1 | transposase | - |
| DSM110277_RS18120 (DSM110277_03642) | 46637..48970 | + | 2334 | WP_243252188.1 | T-DNA border endonuclease VirD2 | Relaxase |
| DSM110277_RS18125 (DSM110277_03643) | 48979..50958 | + | 1980 | WP_243252190.1 | Protein VirD4 | VF |
| DSM110277_RS18130 (DSM110277_03644) | 51221..51862 | + | 642 | WP_092838803.1 | DUF4433 domain-containing protein | Toxin Detail |
| DSM110277_RS18135 (DSM110277_03645) | 51862..52944 | + | 1083 | WP_132998414.1 | macro domain-containing protein | Antitoxin Detail |
| DSM110277_RS18140 (DSM110277_03646) | 53722..56367 | + | 2646 | WP_243252195.1 | hypothetical protein | - |
| DSM110277_RS18145 (DSM110277_03647) | 56586..57662 | - | 1077 | WP_243252196.1 | type IV secretion system protein | - |
| DSM110277_RS18150 (DSM110277_03648) | 57675..58088 | - | 414 | WP_132998428.1 | hypothetical protein | - |
| DSM110277_RS18155 (DSM110277_03649) | 58085..58279 | - | 195 | WP_243252198.1 | DUF4177 domain-containing protein | - |
| DSM110277_RS18160 (DSM110277_03650) | 58276..59262 | - | 987 | WP_243252208.1 | Type IV secretion system protein VirB11 | VF |
| DSM110277_RS18165 (DSM110277_03651) | 59267..60646 | - | 1380 | WP_243252209.1 | Type IV secretion system protein PtlG | VF |
| DSM110277_RS18170 (DSM110277_03652) | 60643..61338 | - | 696 | WP_132998441.1 | Type IV secretion system protein virB9 | VF |
| DSM110277_RS18175 (DSM110277_03653) | 61340..61993 | - | 654 | WP_243252210.1 | type IV secretion system protein | - |
| DSM110277_RS18180 (DSM110277_03654) | 62011..62820 | - | 810 | WP_243252218.1 | type IV secretion system protein | - |
| DSM110277_RS18185 (DSM110277_03655) | 62820..63974 | - | 1155 | WP_243252212.1 | lytic transglycosylase domain-containing protein | - |
| DSM110277_RS18190 (DSM110277_03656) | 63964..64131 | - | 168 | WP_162840128.1 | hypothetical protein | - |
| DSM110277_RS18195 (DSM110277_03657) | 64128..66491 | - | 2364 | WP_037941707.1 | type IV secretion system DNA-binding domain-containing protein | - |
| DSM110277_RS18200 (DSM110277_03658) | 66481..66759 | - | 279 | WP_008327373.1 | hypothetical protein | VF |
| DSM110277_RS18205 (DSM110277_03659) | 66752..67036 | - | 285 | WP_037941840.1 | Type IV secretion system protein virB2 | VF |
| DSM110277_RS18210 (DSM110277_03660) | 67144..67758 | - | 615 | WP_037941841.1 | lytic transglycosylase domain-containing protein | - |
| DSM110277_RS18215 (DSM110277_03661) | 67802..68170 | - | 369 | WP_037941710.1 | hypothetical protein | - |
| DSM110277_RS18220 (DSM110277_03662) | 68372..68632 | + | 261 | WP_037941844.1 | hypothetical protein | - |
| DSM110277_RS18225 | 68757..69014 | + | 258 | WP_037941711.1 | helix-turn-helix transcriptional regulator | - |
| DSM110277_RS18885 (DSM110277_03664) | 69047..69178 | + | 132 | WP_268874241.1 | hypothetical protein | - |
| DSM110277_RS18230 (DSM110277_03665) | 69182..69409 | + | 228 | WP_009503808.1 | hypothetical protein | - |
| DSM110277_RS18235 (DSM110277_03666) | 69529..70275 | - | 747 | WP_235183684.1 | hypothetical protein | - |
| DSM110277_RS18240 (DSM110277_03667) | 70478..72805 | + | 2328 | WP_243252139.1 | heavy metal translocating P-type ATPase | - |
| DSM110277_RS18245 | 72818..73228 | + | 411 | WP_132998294.1 | hypothetical protein | - |
| DSM110277_RS18250 (DSM110277_03668) | 73338..73736 | + | 399 | WP_037941715.1 | FixH family protein | - |
| DSM110277_RS18255 (DSM110277_03669) | 73733..75169 | + | 1437 | WP_243252140.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DSM110277_RS18260 (DSM110277_03670) | 75166..78315 | + | 3150 | Protein_76 | CusA/CzcA family heavy metal efflux RND transporter | - |
| DSM110277_RS18265 (DSM110277_03672) | 78365..79672 | - | 1308 | WP_235183685.1 | sialidase family protein | - |
| DSM110277_RS18270 | 79701..80159 | - | 459 | WP_235183686.1 | cytochrome c | - |
| DSM110277_RS18275 (DSM110277_03673) | 80146..81459 | - | 1314 | WP_243252141.1 | ABC transporter transmembrane domain-containing protein | - |
| DSM110277_RS18280 (DSM110277_03674) | 81468..81998 | - | 531 | WP_243252142.1 | plastocyanin/azurin family copper-binding protein | - |
| DSM110277_RS18285 (DSM110277_03675) | 82085..82774 | - | 690 | WP_243252144.1 | copper-binding protein | - |
| DSM110277_RS18290 (DSM110277_03676) | 82822..84180 | - | 1359 | WP_110476940.1 | copper oxidase | - |
| DSM110277_RS18295 (DSM110277_03677) | 84192..85658 | - | 1467 | WP_243252145.1 | TolC family protein | - |
| DSM110277_RS18300 (DSM110277_03678) | 85658..85879 | - | 222 | WP_221227929.1 | hypothetical protein | - |
| DSM110277_RS18305 | 85953..86375 | - | 423 | WP_081858737.1 | hypothetical protein | - |
| DSM110277_RS18310 (DSM110277_03679) | 86574..86774 | - | 201 | WP_037941729.1 | heavy-metal-associated domain-containing protein | - |
| DSM110277_RS18315 (DSM110277_03680) | 86915..89422 | + | 2508 | WP_243252146.1 | heavy metal translocating P-type ATPase | - |
| DSM110277_RS18320 (DSM110277_03681) | 89441..89860 | + | 420 | WP_037941731.1 | Cu(I)-responsive transcriptional regulator | - |
| DSM110277_RS18325 (DSM110277_03682) | 89993..90865 | + | 873 | WP_037941732.1 | DUF305 domain-containing protein | - |
| DSM110277_RS18330 (DSM110277_03683) | 90888..91652 | + | 765 | WP_184583059.1 | glutaredoxin | - |
| DSM110277_RS18335 (DSM110277_03684) | 91756..92496 | - | 741 | WP_037941734.1 | cytochrome c biogenesis protein CcdA | - |
| DSM110277_RS18340 (DSM110277_03685) | 92493..92984 | - | 492 | WP_051843822.1 | hypothetical protein | - |
| DSM110277_RS18345 (DSM110277_03686) | 92981..93676 | - | 696 | WP_235183688.1 | SCO family protein | - |
| DSM110277_RS18350 (DSM110277_03687) | 93738..94010 | - | 273 | WP_132998288.1 | hypothetical protein | - |
| DSM110277_RS18355 (DSM110277_03688) | 94055..94336 | - | 282 | WP_037941737.1 | hypothetical protein | - |
| DSM110277_RS18360 (DSM110277_03689) | 94419..94931 | - | 513 | WP_243252147.1 | TlpA disulfide reductase family protein | - |
| DSM110277_RS18365 (DSM110277_03690) | 94928..95524 | - | 597 | WP_037941739.1 | DsbE family thiol:disulfide interchange protein | - |
| DSM110277_RS18370 (DSM110277_03691) | 95521..95898 | - | 378 | WP_240558221.1 | cytochrome c | - |
| DSM110277_RS18890 (DSM110277_03692) | 96101..96235 | - | 135 | WP_268874242.1 | hypothetical protein | - |
| DSM110277_RS18375 (DSM110277_03693) | 96302..96757 | - | 456 | WP_037941855.1 | DUF411 domain-containing protein | - |
| DSM110277_RS18380 (DSM110277_03694) | 96795..98141 | - | 1347 | WP_235183690.1 | multicopper oxidase family protein | - |
| DSM110277_RS18385 | 98325..98678 | - | 354 | WP_037941746.1 | hypothetical protein | - |
| DSM110277_RS18390 (DSM110277_03695) | 98900..99262 | - | 363 | WP_037941747.1 | STAS/SEC14 domain-containing protein | - |
| DSM110277_RS18395 (DSM110277_03696) | 99234..100199 | - | 966 | WP_037941750.1 | cation diffusion facilitator family transporter | - |
| DSM110277_RS18400 (DSM110277_03697) | 100189..100944 | - | 756 | WP_243252220.1 | transglutaminase family protein | - |
| DSM110277_RS18405 (DSM110277_03698) | 101040..101618 | - | 579 | WP_037941752.1 | cation transporter | - |
| DSM110277_RS18410 (DSM110277_03699) | 101722..102150 | - | 429 | WP_037941862.1 | IS607 family transposase ISChh1 | Transposase |
| DSM110277_RS18415 (DSM110277_03700) | 102358..102924 | + | 567 | WP_037941863.1 | SCO family protein | - |
| DSM110277_RS18420 (DSM110277_03701) | 102930..103352 | + | 423 | WP_037941754.1 | disulfide bond formation protein B | - |
| DSM110277_RS18425 (DSM110277_03702) | 103349..104008 | + | 660 | WP_037941756.1 | thioredoxin domain-containing protein | - |
| DSM110277_RS18430 (DSM110277_03703) | 104032..104499 | + | 468 | WP_037941757.1 | copper chaperone PCu(A)C | - |
| DSM110277_RS18435 (DSM110277_03704) | 104499..105116 | + | 618 | WP_037941758.1 | SCO family protein | - |
| DSM110277_RS18440 (DSM110277_03705) | 105113..106486 | + | 1374 | WP_037941759.1 | M23 family metallopeptidase | - |
| DSM110277_RS18445 (DSM110277_03706) | 106490..106945 | + | 456 | WP_037941765.1 | DUF411 domain-containing protein | - |
| DSM110277_RS18450 (DSM110277_03707) | 106958..107740 | + | 783 | WP_037941766.1 | ZIP family metal transporter | - |
| DSM110277_RS18455 (DSM110277_03708) | 107769..108227 | + | 459 | WP_037941767.1 | Lipoprotein signal peptidase | VF |
| DSM110277_RS18460 (DSM110277_03709) | 108194..109807 | + | 1614 | WP_037941768.1 | apolipoprotein N-acyltransferase | - |
| DSM110277_RS18465 (DSM110277_03710) | 109798..109965 | + | 168 | WP_037941770.1 | hypothetical protein | - |
| DSM110277_RS18470 (DSM110277_03711) | 109990..111927 | + | 1938 | WP_037941771.1 | penicillin acylase family protein | - |
| DSM110277_RS18475 (DSM110277_03712) | 111924..112925 | + | 1002 | WP_243252149.1 | cytochrome c oxidase assembly protein | - |
| DSM110277_RS18480 (DSM110277_03713) | 113145..113657 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| DSM110277_RS18485 (DSM110277_03714) | 113839..114126 | - | 288 | WP_037941812.1 | zf-TFIIB domain-containing protein | - |
| DSM110277_RS18490 (DSM110277_03715) | 114161..116515 | - | 2355 | WP_037941813.1 | cation-translocating P-type ATPase | - |
| DSM110277_RS18495 (DSM110277_03716) | 116698..116982 | + | 285 | WP_037941814.1 | hypothetical protein | - |
| DSM110277_RS18500 (DSM110277_03717) | 117008..117673 | - | 666 | WP_037941815.1 | L,D-transpeptidase | - |
| DSM110277_RS18505 | 117922..118292 | + | 371 | Protein_126 | IS5/IS1182 family transposase | - |
| DSM110277_RS18510 (DSM110277_03719) | 118415..118867 | - | 453 | WP_037941817.1 | Transcriptional regulator MntR | VF |
| DSM110277_RS18515 (DSM110277_03720) | 119194..120192 | + | 999 | WP_240558219.1 | multicopper oxidase domain-containing protein | - |
| DSM110277_RS18520 (DSM110277_03721) | 120189..121370 | + | 1182 | WP_037941822.1 | metal transporter | - |
| DSM110277_RS18525 (DSM110277_03722) | 121708..121986 | - | 279 | Protein_130 | hypothetical protein | - |
| DSM110277_RS18530 (DSM110277_03723) | 122429..123091 | - | 663 | WP_037941824.1 | DsbA family protein | - |
| DSM110277_RS18535 (DSM110277_03724) | 123176..123754 | - | 579 | WP_037941826.1 | L,D-transpeptidase | - |
| DSM110277_RS18540 (DSM110277_03725) | 123838..124446 | - | 609 | WP_235602562.1 | L,D-transpeptidase | - |
| DSM110277_RS18545 (DSM110277_03726) | 124644..125643 | - | 1000 | Protein_134 | hypothetical protein | - |
| DSM110277_RS18550 (DSM110277_03727) | 125871..126752 | + | 882 | WP_243252150.1 | Tn3 family transposase ISPsy42 | Transposase |
| DSM110277_RS18555 (DSM110277_03728) | 126872..128035 | + | 1164 | WP_243252152.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|