NZ_CP0848991634347..1656053

MGE detailed information

MGE type: Prophage        MGE length: 21707 bp
Accession: NZ_CP084899        Location: 1634347..1656053         Organism: Escherichia coli strain W3110-P       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LHV60_RS07975 (1630862) 1630862..1631608 + 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
LHV60_RS07980 (1631697) 1631697..1632383 + 687 WP_000215549.1 DNA-binding transcriptional regulator rspR -
LHV60_RS07985 (1632560) 1632560..1632763 + 204 WP_000214712.1 putative selenium delivery protein YdfZ -
LHV60_RS07990 (1632798) 1632798..1634258 - 1461 WP_000527743.1 mannitol dehydrogenase family protein -
LHV60_RS07995 (1634347) 1634347..1635714 - 1368 Protein_1562 MHS family MFS transporter -
LHV60_RS08000 (1636235) 1636235..1636348 + 114 WP_120795384.1 YnaM/YnfT family protein -
LHV60_RS08005 (1636417) 1636417..1636650 + 234 WP_000836768.1 cold shock protein YdfK -
LHV60_RS08010 (1636967) 1636967..1637557 + 591 WP_000078177.1 Tn3 family transposase TnpR_ISSba14 Transposase
LHV60_RS08015 (1637655) 1637655..1638230 - 576 WP_000885611.1 tail fiber assembly protein -
LHV60_RS08020 (1638230) 1638230..1639192 - 963 WP_001027733.1 phage tail protein -
LHV60_RS08025 (1639143) 1639143..1639712 - 570 WP_000453612.1 DNA-packaging protein -
LHV60_RS08030 (1640101) 1640101..1640334 + 234 WP_001368374.1 YlcI/YnfO family protein -
LHV60_RS08035 (1640392) 1640392..1640802 + 411 WP_000373090.1 DUF1398 domain-containing protein -
LHV60_RS08040 (1640954) 1640954..1641127 - 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
LHV60_RS08045 (1641299) 1641299..1641454 - 156 WP_001309517.1 protein YnfN -
LHV60_RS08050 (1641533) 1641533..1641598 - 66 WP_120795388.1 small protein YnfR -
LHV60_RS08055 (1641601) 1641601..1641789 - 189 WP_071524604.1 cold-shock protein -
LHV60_RS08060 (1641800) 1641800..1642012 - 213 WP_000066495.1 cold shock protein CspI -
LHV60_RS08065 (1642375) 1642375..1642872 - 498 WP_001071769.1 DUF2514 domain-containing protein -
LHV60_RS08070 (1642869) 1642869..1643402 - 534 WP_001092971.1 lysozyme -
LHV60_RS08075 (1643399) 1643399..1643710 - 312 WP_000189916.1 YdfR family protein -
LHV60_RS08080 (1643715) 1643715..1643930 - 216 WP_000839590.1 phage lysis protein EssD -
LHV60_RS08085 (1644150) 1644150..1644320 + 171 WP_211180497.1 putative zinc-binding protein YnfU -
LHV60_RS08090 (1644684) 1644684..1644899 - 216 WP_000066484.1 cold shock-like protein CspB -
LHV60_RS08095 (1645200) 1645200..1645412 + 213 WP_000087756.1 cold shock-like protein CspF -
LHV60_RS08100 (1645467) 1645467..1645556 + 90 WP_120795389.1 hypothetical protein -
LHV60_RS08105 (1645834) 1645834..1646586 - 753 WP_001047135.1 antitermination protein -
LHV60_RS08110 (1646600) 1646600..1647649 - 1050 WP_001393597.1 DUF968 domain-containing protein -
LHV60_RS08115 (1647651) 1647651..1647929 - 279 WP_012304870.1 hypothetical protein -
LHV60_RS08120 (1647996) 1647996..1648247 - 252 WP_000980994.1 protein Rem -
LHV60_RS08125 (1648464) 1648464..1648619 - 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
LHV60_RS08130 (1648691) 1648691..1648978 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
LHV60_RS08135 (1648978) 1648978..1649217 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
LHV60_RS08140 (1649242) 1649242..1649547 + 306 WP_001326990.1 protein YdfV -
LHV60_RS08145 (1649750) 1649750..1650082 + 333 WP_001301033.1 FlxA-like family protein -
LHV60_RS08150 (1650519) 1650519..1650668 - 150 WP_011443592.1 protein YdfW -
LHV60_RS08155 (1650703) 1650703..1650981 - 279 Protein_1594 hypothetical protein -
LHV60_RS08160 (1650965) 1650965..1651195 - 231 WP_000920568.1 dicB transcriptional regulator DicC -
LHV60_RS08165 (1651279) 1651279..1651686 + 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
LHV60_RS08170 (1651853) 1651853..1652008 + 156 WP_000379575.1 DUF1391 family protein -
LHV60_RS22615 (1652010) 1652010..1652138 + 129 WP_000344964.1 protein YdfB -
LHV60_RS08175 (1652168) 1652168..1652386 + 219 WP_001171942.1 protein YdfC -
LHV60_RS08180 (1652954) 1652954..1653142 + 189 WP_000854559.1 cell division inhibition protein DicB -
LHV60_RS08185 (1653139) 1653139..1653330 + 192 WP_001083297.1 lysis protein YdfD -
LHV60_RS08190 (1653423) 1653423..1654190 + 768 Protein_1602 exonuclease -
LHV60_RS08195 (1654187) 1654187..1654882 + 696 Protein_1603 IS3 family transposase IS2 Transposase
LHV60_RS08200 (1654896) 1654896..1656053 + 1158 Protein_1604 Putative defective protein IntQ ; Integrase Integrase
LHV60_RS08205 (1656241) 1656241..1657260 - 1020 WP_000836066.1 Zn-dependent oxidoreductase -
LHV60_RS08210 (1657272) 1657272..1658486 - 1215 WP_001295394.1 starvation-sensing protein RspA -
LHV60_RS08215 (1658692) 1658692..1659018 - 327 WP_000598292.1 YnfA family protein -
LHV60_RS08220 (1659153) 1659153..1659494 + 342 WP_000705211.1 DUF1283 family protein -
LHV60_RS08225 (1659529) 1659529..1660089 + 561 WP_001138581.1 spermidine N1-acetyltransferase -
LHV60_RS08230 (1660092) 1660092..1660802 - 711 WP_001321287.1 YnfC family lipoprotein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.002
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0
Escherichia coli DH1 Prophage TA27404 NC_017638 1615804..1634890 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.002
Escherichia coli strain DH5alpha Prophage TA90479 NZ_CP025520 488442..510148 0