MGE detailed information
MGE type: Prophage MGE length: 11095 bp
Accession: NZ_CP084879 Location: 2317908..2329002 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Accession: NZ_CP084879 Location: 2317908..2329002 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGV73_RS11885 (2313446) | 2313446..2313613 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| LGV73_RS11890 (2314015) | 2314015..2314776 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| LGV73_RS11895 (2314844) | 2314844..2315047 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| LGV73_RS11900 (2315295) | 2315295..2317574 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| LGV73_RS11905 (2317908) | 2317908..2318336 | - | 429 | Protein_2329 | hypothetical protein | VF |
| LGV73_RS11910 (2318393) | 2318393..2319090 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| LGV73_RS11915 (2319106) | 2319106..2320011 | + | 906 | Protein_2331 | IS3 family transposase IS600 | Transposase |
| LGV73_RS11920 (2320008) | 2320008..2320313 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| LGV73_RS11925 (2320338) | 2320338..2320577 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LGV73_RS11930 (2320577) | 2320577..2320864 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LGV73_RS11935 (2320936) | 2320936..2321091 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LGV73_RS11940 (2321309) | 2321309..2321560 | + | 252 | WP_000980987.1 | protein Rem | - |
| LGV73_RS11945 (2321627) | 2321627..2321905 | + | 279 | Protein_2337 | hypothetical protein | - |
| LGV73_RS11950 (2321907) | 2321907..2322956 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| LGV73_RS11955 (2322969) | 2322969..2323325 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LGV73_RS11960 (2323340) | 2323340..2324161 | + | 822 | WP_000762884.1 | antitermination protein | - |
| LGV73_RS11975 (2325082) | 2325082..2325190 | + | 109 | Protein_2341 | DUF3927 family protein | - |
| LGV73_RS11980 (2325471) | 2325471..2325806 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| LGV73_RS11985 (2326066) | 2326066..2326251 | + | 186 | Protein_2343 | DUF1737 domain-containing protein | - |
| LGV73_RS11990 (2326251) | 2326251..2326412 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| LGV73_RS11995 (2326562) | 2326562..2326741 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| LGV73_RS12000 (2327662) | 2327662..2327663 | - | 2 | WP_272606553.1 | IS3 family transposase ISSfl10 | Transposase |
| LGV73_RS12005 (2327983) | 2327983..2329002 | + | 1020 | Protein_2347 | MHS family MFS transporter YdfJ | - |
| LGV73_RS12010 (2329091) | 2329091..2330551 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| LGV73_RS12015 (2330587) | 2330587..2330790 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LGV73_RS12020 (2330968) | 2330968..2331654 | - | 687 | WP_005127032.1 | DNA-binding transcriptional regulator rspR | - |
| LGV73_RS12025 (2331743) | 2331743..2332489 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.01 |