MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84354 bp
Accession: NZ_CP084776 Location: 1..84354 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_6
Accession: NZ_CP084776 Location: 1..84354 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM29_RS29245 (LGM29_29245) | 1..1014 | + | 1014 | WP_136532111.1 | plasmid replication initiator RepA | - |
| LGM29_RS29250 (LGM29_29250) | 2001..2327 | - | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| LGM29_RS29255 (LGM29_29255) | 2509..2790 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| LGM29_RS29260 (LGM29_29260) | 2844..3455 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| LGM29_RS29265 (LGM29_29265) | 3452..3583 | - | 132 | Protein_5 | hypothetical protein | VF |
| LGM29_RS29270 (LGM29_29270) | 3640..4632 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| LGM29_RS29275 (LGM29_29275) | 4977..5681 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS29280 (LGM29_29280) | 5833..7044 | + | 1212 | WP_032415728.1 | hypothetical protein | - |
| LGM29_RS29285 (LGM29_29285) | 7178..7669 | + | 492 | WP_004206662.1 | hypothetical protein | - |
| LGM29_RS29290 (LGM29_29290) | 7730..7933 | + | 204 | WP_004206661.1 | HHA domain-containing protein | - |
| LGM29_RS29295 (LGM29_29295) | 8621..8887 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LGM29_RS29300 (LGM29_29300) | 8875..9357 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LGM29_RS29305 (LGM29_29305) | 9558..10961 | + | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| LGM29_RS29310 (LGM29_29310) | 10990..11622 | - | 633 | WP_001567369.1 | hypothetical protein | - |
| LGM29_RS29315 (LGM29_29315) | 11887..12492 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LGM29_RS29320 (LGM29_29320) | 12587..15484 | + | 2898 | WP_000091108.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LGM29_RS29325 (LGM29_29325) | 15517..15978 | - | 462 | Protein_17 | type IV secretion system DNA-binding domain-containing protein | - |
| LGM29_RS29330 (LGM29_29330) | 16122..17102 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| LGM29_RS29335 (LGM29_29335) | 17170..17484 | - | 315 | Protein_19 | conjugal transfer protein TraS | - |
| LGM29_RS29340 (LGM29_29340) | 17487..18731 | - | 1245 | Protein_20 | conjugal transfer protein TraG | - |
| LGM29_RS29345 (LGM29_29345) | 18794..19956 | + | 1163 | WP_087759146.1 | IS3 family transposase ISPeat2 | Transposase |
| LGM29_RS29350 (LGM29_29350) | 19987..21399 | - | 1413 | Protein_22 | conjugal transfer mating pair stabilization protein TraG | - |
| LGM29_RS29355 (LGM29_29355) | 21681..22757 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| LGM29_RS29360 (LGM29_29360) | 22762..24789 | - | 2028 | Protein_24 | type IV secretion system protein TraC | - |
| LGM29_RS29365 (LGM29_29365) | 24861..25259 | - | 399 | WP_074194504.1 | hypothetical protein | - |
| LGM29_RS29370 (LGM29_29370) | 25441..25593 | - | 153 | WP_224518895.1 | hypothetical protein | - |
| LGM29_RS29375 (LGM29_29375) | 25636..26040 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| LGM29_RS29380 (LGM29_29380) | 26107..26418 | - | 312 | WP_025712701.1 | hypothetical protein | - |
| LGM29_RS29385 (LGM29_29385) | 26419..26637 | - | 219 | WP_004195468.1 | hypothetical protein | - |
| LGM29_RS29390 (LGM29_29390) | 26661..26909 | - | 249 | WP_223175793.1 | hypothetical protein | - |
| LGM29_RS29395 (LGM29_29395) | 26980..27378 | - | 399 | WP_020277946.1 | hypothetical protein | - |
| LGM29_RS29400 (LGM29_29400) | 27533..28117 | - | 585 | WP_020277945.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LGM29_RS29405 (LGM29_29405) | 28191..29615 | - | 1425 | WP_015065626.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LGM29_RS29410 (LGM29_29410) | 29615..30355 | - | 741 | WP_048235042.1 | type-F conjugative transfer system secretin TraK | - |
| LGM29_RS29415 (LGM29_29415) | 30342..30908 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| LGM29_RS29420 (LGM29_29420) | 30928..31233 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LGM29_RS29425 (LGM29_29425) | 31247..31615 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LGM29_RS29430 (LGM29_29430) | 31683..31883 | - | 201 | WP_046664192.1 | TraY domain-containing protein | - |
| LGM29_RS29435 (LGM29_29435) | 31969..32670 | - | 702 | WP_025712700.1 | hypothetical protein | - |
| LGM29_RS29440 (LGM29_29440) | 32900..33292 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LGM29_RS29445 (LGM29_29445) | 33724..34209 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| LGM29_RS29450 (LGM29_29450) | 34242..34571 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| LGM29_RS29455 (LGM29_29455) | 34604..35425 | - | 822 | WP_032454971.1 | DUF932 domain-containing protein | - |
| LGM29_RS29460 (LGM29_29460) | 36108..36428 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| LGM29_RS29465 (LGM29_29465) | 36463..36717 | - | 255 | WP_024191981.1 | DNA polymerase III subunit theta | - |
| LGM29_RS29470 (LGM29_29470) | 36905..37096 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| LGM29_RS29475 (LGM29_29475) | 37139..37645 | - | 507 | WP_117139064.1 | antirestriction protein ArdA | - |
| LGM29_RS29480 (LGM29_29480) | 37688..38116 | - | 429 | WP_040088187.1 | antirestriction protein | - |
| LGM29_RS29485 (LGM29_29485) | 38797..39564 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| LGM29_RS29490 (LGM29_29490) | 39618..40037 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| LGM29_RS29495 (LGM29_29495) | 40047..40268 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| LGM29_RS29500 (LGM29_29500) | 40268..40969 | - | 702 | WP_040088183.1 | DNA methylase | - |
| LGM29_RS29505 (LGM29_29505) | 41041..41210 | - | 170 | Protein_53 | hypothetical protein | - |
| LGM29_RS29510 (LGM29_29510) | 41406..41636 | - | 231 | WP_009309993.1 | hypothetical protein | - |
| LGM29_RS29515 (LGM29_29515) | 41697..42368 | - | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| LGM29_RS29520 (LGM29_29520) | 42371..43342 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| LGM29_RS29525 (LGM29_29525) | 43591..45078 | - | 1488 | WP_020803845.1 | group II intron reverse transcriptase/maturase | - |
| LGM29_RS29530 (LGM29_29530) | 45485..45916 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LGM29_RS29535 (LGM29_29535) | 45916..47187 | + | 1272 | WP_048235048.1 | Y-family DNA polymerase | - |
| LGM29_RS29540 (LGM29_29540) | 47269..48243 | - | 975 | WP_048235050.1 | ParB family protein | - |
| LGM29_RS29545 (LGM29_29545) | 48243..49448 | - | 1206 | WP_048235052.1 | AAA family ATPase | - |
| LGM29_RS29550 (LGM29_29550) | 49854..50783 | + | 930 | WP_048235054.1 | Recombination-promoting nuclease RpnA | VF |
| LGM29_RS29555 (LGM29_29555) | 50780..51387 | - | 608 | Protein_63 | DUF2913 family protein | - |
| LGM29_RS29560 (LGM29_29560) | 51646..51921 | - | 276 | WP_226550269.1 | HNH endonuclease | - |
| LGM29_RS29800 | 52244..52369 | - | 126 | WP_255152688.1 | hypothetical protein | - |
| LGM29_RS29565 (LGM29_29565) | 53327..54193 | - | 867 | WP_048235056.1 | replication initiation protein | - |
| LGM29_RS29570 (LGM29_29570) | 54965..55747 | - | 783 | WP_048235058.1 | site-specific integrase | - |
| LGM29_RS29575 (LGM29_29575) | 55785..56501 | - | 717 | WP_053059918.1 | hypothetical protein | - |
| LGM29_RS29580 (LGM29_29580) | 56494..57303 | - | 810 | WP_053059919.1 | hypothetical protein | - |
| LGM29_RS29585 (LGM29_29585) | 57300..58220 | - | 921 | WP_048235060.1 | hypothetical protein | - |
| LGM29_RS29590 (LGM29_29590) | 58808..59038 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LGM29_RS29595 (LGM29_29595) | 59035..59451 | + | 417 | WP_220675994.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LGM29_RS29600 (LGM29_29600) | 59486..59731 | + | 246 | WP_065905238.1 | hypothetical protein | - |
| LGM29_RS29605 (LGM29_29605) | 59795..60013 | + | 219 | WP_021312527.1 | hypothetical protein | - |
| LGM29_RS29610 (LGM29_29610) | 60092..60418 | + | 327 | WP_124989605.1 | hypothetical protein | - |
| LGM29_RS29615 (LGM29_29615) | 60658..60921 | + | 264 | WP_004118691.1 | hypothetical protein | - |
| LGM29_RS29620 (LGM29_29620) | 60918..61484 | + | 567 | WP_009654312.1 | hypothetical protein | - |
| LGM29_RS29625 (LGM29_29625) | 61515..62009 | + | 495 | WP_016528789.1 | hypothetical protein | - |
| LGM29_RS29630 (LGM29_29630) | 62070..62273 | + | 204 | WP_004150739.1 | HHA domain-containing protein | - |
| LGM29_RS29635 (LGM29_29635) | 62322..62501 | + | 180 | WP_226550274.1 | hypothetical protein | - |
| LGM29_RS29640 (LGM29_29640) | 62535..63232 | + | 698 | WP_108702448.1 | IS1 family transposase IS1R | Transposase |
| LGM29_RS29645 (LGM29_29645) | 63406..63729 | + | 324 | WP_017899891.1 | hypothetical protein | - |
| LGM29_RS29650 (LGM29_29650) | 64048..65052 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LGM29_RS29655 (LGM29_29655) | 65453..66028 | + | 576 | WP_226550263.1 | DUF2971 domain-containing protein | - |
| LGM29_RS29660 (LGM29_29660) | 66033..68930 | - | 2898 | WP_000091108.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LGM29_RS29665 (LGM29_29665) | 69025..69630 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LGM29_RS29670 (LGM29_29670) | 69664..71166 | + | 1503 | Protein_87 | type IV secretion system DNA-binding domain-containing protein | - |
| LGM29_RS29675 (LGM29_29675) | 71166..76427 | + | 5262 | WP_226550265.1 | Multifunctional conjugation protein TraI | Relaxase |
| LGM29_RS29680 (LGM29_29680) | 76507..77232 | + | 726 | WP_226550267.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LGM29_RS29685 (LGM29_29685) | 77389..77982 | + | 594 | WP_032744221.1 | fertility inhibition protein FinO | - |
| LGM29_RS29690 (LGM29_29690) | 78143..78745 | + | 603 | WP_072216873.1 | PIN domain-containing protein | - |
| LGM29_RS29695 (LGM29_29695) | 78795..79016 | + | 222 | WP_004195564.1 | hypothetical protein | - |
| LGM29_RS29700 (LGM29_29700) | 79072..79143 | + | 72 | Protein_93 | hypothetical protein | - |
| LGM29_RS29705 (LGM29_29705) | 79230..80255 | + | 1026 | WP_226548984.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS29710 (LGM29_29710) | 80550..81518 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| LGM29_RS29715 (LGM29_29715) | 81574..82161 | + | 588 | WP_226550272.1 | DUF2726 domain-containing protein | - |
| LGM29_RS29720 (LGM29_29720) | 82158..82466 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| LGM29_RS29725 (LGM29_29725) | 82571..83122 | + | 552 | WP_004195002.1 | Phospholipase D | VF |
| LGM29_RS29730 (LGM29_29730) | 83240..83509 | + | 270 | WP_072198323.1 | replication regulatory protein RepA | - |
| LGM29_RS29735 (LGM29_29735) | 83741..83818 | + | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|