MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 24161 bp
Accession: NZ_CP084656 Location: 3427202..3451362 Organism: Pectobacterium versatile strain SR1 Replicon: chromosome
Accession: NZ_CP084656 Location: 3427202..3451362 Organism: Pectobacterium versatile strain SR1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL96_RS15205 (LGL96_15205) | 3422696..3423118 | + | 423 | WP_107332399.1 | MarR family transcriptional regulator | - |
| LGL96_RS15210 (LGL96_15210) | 3423185..3424372 | - | 1188 | WP_211026574.1 | MFS transporter | - |
| LGL96_RS15215 (LGL96_15215) | 3424488..3425444 | + | 957 | WP_103942723.1 | AraC family transcriptional regulator | - |
| LGL96_RS15220 (LGL96_15220) | 3425770..3426249 | + | 480 | WP_103972494.1 | hypothetical protein | - |
| LGL96_RS15225 (LGL96_15225) | 3426828..3427037 | - | 210 | WP_103942719.1 | hypothetical protein | - |
| LGL96_RS15230 (LGL96_15230) | 3427649..3428998 | + | 1350 | WP_170309990.1 | hypothetical protein | VF |
| LGL96_RS15235 (LGL96_15235) | 3428988..3430274 | + | 1287 | WP_103972350.1 | outer membrane beta-barrel protein | - |
| LGL96_RS15240 (LGL96_15240) | 3430276..3430833 | + | 558 | WP_225586018.1 | hypothetical protein | VF |
| LGL96_RS15245 (LGL96_15245) | 3430836..3432968 | + | 2133 | WP_103972349.1 | polysaccharide biosynthesis tyrosine autokinase | - |
| LGL96_RS15250 (LGL96_15250) | 3432982..3434193 | + | 1212 | WP_130633941.1 | capsular biosynthesis protein | - |
| LGL96_RS15255 (LGL96_15255) | 3434190..3435572 | + | 1383 | WP_180789944.1 | capsular biosynthesis protein | - |
| LGL96_RS15260 (LGL96_15260) | 3435565..3436554 | + | 990 | WP_105879198.1 | hypothetical protein | VF |
| LGL96_RS15265 (LGL96_15265) | 3436564..3437775 | + | 1212 | WP_180789983.1 | glycosyltransferase family 4 protein | - |
| LGL96_RS15270 (LGL96_15270) | 3437777..3438889 | + | 1113 | WP_039507741.1 | glycosyltransferase family 4 protein | - |
| LGL96_RS15275 (LGL96_15275) | 3438892..3439299 | + | 408 | WP_039490298.1 | hypothetical protein | - |
| LGL96_RS15280 (LGL96_15280) | 3439338..3440786 | + | 1449 | WP_225586017.1 | DUF4832 domain-containing protein | - |
| LGL96_RS15285 (LGL96_15285) | 3440813..3441313 | + | 501 | WP_103861241.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| LGL96_RS15290 (LGL96_15290) | 3441520..3441805 | + | 286 | Protein_2970 | DUF1778 domain-containing protein | - |
| LGL96_RS15295 (LGL96_15295) | 3441926..3442144 | - | 219 | WP_225586015.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| LGL96_RS15300 (LGL96_15300) | 3442159..3442407 | - | 249 | WP_225586013.1 | helix-turn-helix transcriptional regulator | - |
| LGL96_RS15305 (LGL96_15305) | 3442414..3442556 | + | 143 | Protein_2973 | helix-turn-helix domain-containing protein | - |
| LGL96_RS15310 (LGL96_15310) | 3442895..3443188 | + | 294 | WP_161128727.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LGL96_RS15315 (LGL96_15315) | 3443185..3443679 | + | 495 | WP_130621813.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LGL96_RS15320 (LGL96_15320) | 3444105..3445835 | + | 1731 | WP_130621814.1 | AAA family ATPase | - |
| LGL96_RS15325 (LGL96_15325) | 3445921..3446763 | + | 843 | WP_130621815.1 | DNA adenine methylase | - |
| LGL96_RS15330 (LGL96_15330) | 3446963..3447268 | - | 306 | WP_225586011.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LGL96_RS15335 (LGL96_15335) | 3447271..3447489 | - | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LGL96_RS15340 (LGL96_15340) | 3447548..3448291 | - | 744 | WP_225586009.1 | MobC family replication-relaxation protein | - |
| LGL96_RS15345 (LGL96_15345) | 3449190..3449531 | - | 342 | WP_225586008.1 | hypothetical protein | - |
| LGL96_RS15350 (LGL96_15350) | 3449718..3449912 | + | 195 | WP_012773549.1 | YlcI/YnfO family protein | - |
| LGL96_RS15355 (LGL96_15355) | 3450007..3451266 | - | 1260 | WP_225586007.1 | hypothetical protein ; Integrase | Integrase |
| LGL96_RS15365 (LGL96_15365) | 3452180..3454333 | + | 2154 | WP_130633935.1 | ornithine decarboxylase | - |
| LGL96_RS15370 (LGL96_15370) | 3454410..3455861 | - | 1452 | WP_103861222.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|