MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85059 bp
Accession: NZ_CP084644 Location: 1..85059 Organism: Yersinia ruckeri strain 17Y0159 Replicon: plasmid p17Y0159.1
Accession: NZ_CP084644 Location: 1..85059 Organism: Yersinia ruckeri strain 17Y0159 Replicon: plasmid p17Y0159.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL91_RS17500 (LGL91_17540) | 4..837 | + | 834 | WP_234057290.1 | MurR/RpiR family transcriptional regulator | - |
| LGL91_RS17505 (LGL91_17545) | 974..1306 | + | 333 | Protein_1 | ISKra4 family transposase ISEc51 | Transposase |
| LGL91_RS17510 (LGL91_17550) | 1345..2031 | + | 687 | Protein_2 | IS66 family transposase ISAba24 | Transposase |
| LGL91_RS17515 (LGL91_17555) | 2058..2852 | - | 795 | WP_234057254.1 | ISAs1 family transposase ISAma3 | Transposase |
| LGL91_RS17520 (LGL91_17560) | 2940..3158 | - | 219 | WP_234057255.1 | hypothetical protein | - |
| LGL91_RS17525 (LGL91_17565) | 3155..3637 | - | 483 | WP_234057256.1 | hypothetical protein | - |
| LGL91_RS17530 (LGL91_17570) | 3779..4198 | - | 420 | WP_234057257.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LGL91_RS17535 (LGL91_17575) | 4227..4406 | - | 180 | WP_234057258.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LGL91_RS17540 (LGL91_17580) | 4635..4892 | + | 258 | WP_234057259.1 | hypothetical protein | VF |
| LGL91_RS17545 (LGL91_17585) | 4887..5576 | - | 690 | Protein_9 | IS256 family transposase ISAba42 | Transposase |
| LGL91_RS17550 (LGL91_17590) | 5635..6432 | + | 798 | WP_234057260.1 | aconitase family protein | - |
| LGL91_RS17555 (LGL91_17595) | 6443..6946 | + | 504 | WP_234057261.1 | 3-isopropylmalate dehydratase | - |
| LGL91_RS17560 (LGL91_17600) | 6936..8093 | + | 1158 | WP_234057262.1 | PrpF domain-containing protein | - |
| LGL91_RS17565 (LGL91_17605) | 8446..9131 | + | 686 | Protein_13 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17570 (LGL91_17610) | 9166..9432 | - | 267 | WP_234057263.1 | hypothetical protein | - |
| LGL91_RS17575 (LGL91_17615) | 9646..10440 | + | 795 | WP_234057264.1 | ParA family protein | - |
| LGL91_RS17580 (LGL91_17620) | 10427..10678 | + | 252 | WP_176035916.1 | hypothetical protein | - |
| LGL91_RS17585 (LGL91_17625) | 10903..11238 | + | 336 | WP_234057265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGL91_RS17590 (LGL91_17630) | 11235..11591 | + | 357 | WP_234057266.1 | DNA-binding protein | - |
| LGL91_RS17595 (LGL91_17635) | 11744..12722 | + | 979 | Protein_19 | conjugal transfer protein TraN | - |
| LGL91_RS17600 (LGL91_17640) | 12798..13343 | + | 546 | Protein_20 | conjugal transfer protein TraF | - |
| LGL91_RS17605 (LGL91_17645) | 13433..13945 | - | 513 | WP_234057267.1 | hypothetical protein | - |
| LGL91_RS17610 (LGL91_17650) | 14166..14321 | - | 156 | WP_276573971.1 | hypothetical protein | - |
| LGL91_RS17615 (LGL91_17655) | 14532..15002 | - | 471 | WP_234057268.1 | SapC family protein | - |
| LGL91_RS17620 (LGL91_17660) | 15199..15654 | - | 456 | WP_234057269.1 | hypothetical protein | - |
| LGL91_RS17625 (LGL91_17665) | 15720..16390 | - | 671 | Protein_25 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LGL91_RS17630 (LGL91_17675) | 17273..17539 | - | 267 | WP_234057270.1 | hypothetical protein | VF |
| LGL91_RS17635 (LGL91_17680) | 17506..20031 | - | 2526 | WP_265099273.1 | Adhesin BmaC autotransporter | VF |
| LGL91_RS17640 (LGL91_17685) | 20060..21865 | - | 1806 | WP_265099270.1 | hypothetical protein | VF |
| LGL91_RS17645 (LGL91_17690) | 21946..22149 | - | 204 | Protein_29 | DDE-type integrase/transposase/recombinase | - |
| LGL91_RS17650 (LGL91_17695) | 22215..22904 | + | 690 | WP_234057271.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17655 (LGL91_17700) | 22988..23302 | + | 315 | Protein_31 | integrase core domain-containing protein | - |
| LGL91_RS17660 (LGL91_17705) | 23299..23706 | + | 408 | WP_234057272.1 | SapC family protein | - |
| LGL91_RS17665 (LGL91_17710) | 24089..25261 | + | 1173 | WP_234057273.1 | FMN-dependent L-lactate dehydrogenase LldD | - |
| LGL91_RS17670 (LGL91_17715) | 25346..25912 | + | 567 | WP_234057274.1 | IS6 family transposase ISSpu17 | Transposase |
| LGL91_RS17675 (LGL91_17720) | 25894..26581 | - | 688 | Protein_35 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17680 (LGL91_17725) | 26718..26981 | - | 264 | WP_234057275.1 | pentapeptide MXKDX repeat protein | - |
| LGL91_RS17685 (LGL91_17730) | 27041..27829 | - | 789 | WP_234057284.1 | molybdopterin-dependent oxidoreductase | - |
| LGL91_RS17690 (LGL91_17735) | 27837..28448 | - | 612 | WP_234057276.1 | cytochrome b/b6 domain-containing protein | - |
| LGL91_RS17695 (LGL91_17740) | 28525..29193 | - | 669 | Protein_39 | IS6 family transposase ISPko6 | Transposase |
| LGL91_RS17700 (LGL91_17745) | 29589..30278 | + | 690 | WP_234057225.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17705 (LGL91_17750) | 30333..30617 | + | 285 | Protein_41 | ISAs1 family transposase | - |
| LGL91_RS18320 | 30894..31241 | + | 348 | WP_265099271.1 | hypothetical protein | VF |
| LGL91_RS18325 | 31348..31674 | + | 327 | WP_265099272.1 | hypothetical protein | VF |
| LGL91_RS17715 (LGL91_17760) | 31921..32236 | + | 316 | Protein_44 | transposase | - |
| LGL91_RS17720 (LGL91_17765) | 32479..32796 | + | 318 | WP_234057277.1 | hypothetical protein | - |
| LGL91_RS17725 (LGL91_17770) | 33331..33750 | + | 420 | Protein_46 | IS21 family transposase ISSso4 | Transposase |
| LGL91_RS17730 (LGL91_17775) | 33768..33926 | + | 159 | Protein_47 | IS6 family transposase | - |
| LGL91_RS17735 (LGL91_17785) | 34242..34490 | - | 249 | WP_234057278.1 | hypothetical protein | - |
| LGL91_RS17740 (LGL91_17790) | 35059..36162 | - | 1104 | Protein_49 | ISAs1 family transposase ISAma3 | Transposase |
| LGL91_RS17745 (LGL91_17795) | 36281..36972 | + | 692 | Protein_50 | IS6 family transposase ISSpu17 | Transposase |
| LGL91_RS17750 (LGL91_17800) | 37316..37543 | + | 228 | WP_234057279.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LGL91_RS17755 (LGL91_17805) | 37545..37871 | + | 327 | WP_234057280.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGL91_RS17760 (LGL91_17810) | 38050..38738 | + | 689 | WP_234057281.1 | IS6 family transposase ISPko6 | Transposase |
| LGL91_RS17765 (LGL91_17815) | 38791..39020 | + | 230 | Protein_54 | transposase | - |
| LGL91_RS17770 (LGL91_17820) | 39105..40043 | - | 939 | WP_234057282.1 | hypothetical protein | VF |
| LGL91_RS17775 (LGL91_17825) | 40449..41003 | + | 555 | Protein_56 | ISAs1 family transposase ISSba1 | Transposase |
| LGL91_RS17780 (LGL91_17830) | 41046..42246 | + | 1201 | Protein_57 | IS3 family transposase | - |
| LGL91_RS17785 (LGL91_17835) | 42486..43037 | - | 552 | WP_265099274.1 | IS110 family transposase ISXpo1 | Transposase |
| LGL91_RS17795 (LGL91_17845) | 44278..44757 | - | 480 | Protein_60 | IS110 family transposase ISXpo1 | Transposase |
| LGL91_RS17800 (LGL91_17850) | 44830..44931 | - | 102 | Protein_61 | IS6 family transposase | - |
| LGL91_RS17805 (LGL91_17855) | 44973..45194 | + | 222 | WP_234057222.1 | ProQ/FINO family protein | - |
| LGL91_RS17810 (LGL91_17860) | 45266..45562 | + | 297 | WP_234057223.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL91_RS17815 (LGL91_17865) | 45564..45848 | + | 285 | WP_234057224.1 | putative addiction module antidote protein | Antitoxin Detail |
| LGL91_RS17820 (LGL91_17870) | 45903..46592 | - | 690 | WP_234057225.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17825 (LGL91_17875) | 47312..49066 | + | 1755 | WP_234057226.1 | hypothetical protein | VF |
| LGL91_RS17830 (LGL91_17880) | 49154..54262 | + | 5109 | WP_234057227.1 | Heme/hemopexin-binding protein | VF |
| LGL91_RS17835 (LGL91_17885) | 54241..54408 | + | 168 | WP_234057228.1 | hypothetical protein | - |
| LGL91_RS17840 (LGL91_17890) | 54569..55294 | + | 726 | WP_234057229.1 | hypothetical protein | - |
| LGL91_RS17845 (LGL91_17895) | 55531..56145 | + | 615 | WP_234057230.1 | DUF2913 family protein | - |
| LGL91_RS17850 (LGL91_17900) | 56111..56212 | + | 102 | Protein_71 | IS6 family transposase | - |
| LGL91_RS17855 (LGL91_17905) | 56253..56942 | - | 690 | WP_234057231.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17860 (LGL91_17910) | 58157..58846 | + | 690 | WP_234057232.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17865 (LGL91_17915) | 58847..59101 | + | 255 | WP_234057286.1 | hypothetical protein | - |
| LGL91_RS17870 (LGL91_17920) | 59082..60293 | + | 1212 | WP_234057233.1 | IS91 family transposase ISSbo1 | Transposase |
| LGL91_RS17875 (LGL91_17925) | 61517..61789 | - | 273 | WP_234057234.1 | hypothetical protein | - |
| LGL91_RS17880 (LGL91_17930) | 61792..62436 | - | 645 | WP_234057235.1 | plasmid replication initiator RepA | - |
| LGL91_RS17885 (LGL91_17940) | 62722..62988 | - | 267 | WP_234057236.1 | replication regulatory protein RepA | - |
| LGL91_RS17890 (LGL91_17945) | 63143..63449 | - | 307 | Protein_79 | hypothetical protein | - |
| LGL91_RS17895 (LGL91_17950) | 63765..64354 | - | 590 | Protein_80 | DUF2726 domain-containing protein | - |
| LGL91_RS17900 (LGL91_17955) | 64354..64644 | - | 291 | WP_234057237.1 | hypothetical protein | - |
| LGL91_RS17905 (LGL91_17960) | 65139..65471 | - | 333 | WP_234057287.1 | c-type lysozyme inhibitor | - |
| LGL91_RS17910 (LGL91_17965) | 65577..65720 | - | 144 | Protein_83 | complement resistance protein TraT | - |
| LGL91_RS17915 (LGL91_17970) | 65746..66282 | - | 537 | Protein_84 | ProQ/FINO family protein | - |
| LGL91_RS17920 (LGL91_17975) | 66310..66849 | - | 540 | WP_234057238.1 | Cardiolipin synthase A | VF |
| LGL91_RS17925 (LGL91_17980) | 67006..67284 | - | 279 | WP_234057239.1 | hypothetical protein | - |
| LGL91_RS18330 (LGL91_17985) | 67406..67564 | - | 159 | WP_265099268.1 | type I toxin-antitoxin system Hok family toxin | - |
| LGL91_RS17935 (LGL91_17990) | 67917..68528 | - | 612 | WP_234057240.1 | IS110 family transposase ISXpo1 | Transposase |
| LGL91_RS17940 (LGL91_17995) | 68701..68967 | + | 267 | WP_234057241.1 | DUF1471 domain-containing protein | - |
| LGL91_RS17945 (LGL91_18000) | 69005..69562 | + | 558 | WP_234057242.1 | hypothetical protein | VF |
| LGL91_RS17950 (LGL91_18005) | 69999..70451 | + | 453 | WP_234057243.1 | DUF417 family protein | - |
| LGL91_RS17955 (LGL91_18010) | 70539..70727 | - | 189 | Protein_92 | ATP-binding protein | - |
| LGL91_RS17960 (LGL91_18015) | 70791..71480 | + | 690 | WP_234057244.1 | IS6 family transposase ISSba18 | Transposase |
| LGL91_RS17965 (LGL91_18020) | 71564..72379 | - | 816 | WP_234057245.1 | 5-deoxy-glucuronate isomerase | - |
| LGL91_RS17970 (LGL91_18025) | 72389..73279 | - | 891 | WP_234057246.1 | myo-inosose-2 dehydratase | - |
| LGL91_RS17975 (LGL91_18030) | 73308..75215 | - | 1908 | WP_265099269.1 | 5-dehydro-2-deoxygluconokinase | - |
| LGL91_RS17980 (LGL91_18035) | 75225..76358 | - | 1134 | WP_234057247.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LGL91_RS17985 (LGL91_18040) | 76382..77410 | - | 1029 | WP_234057248.1 | ABC transporter permease | - |
| LGL91_RS17990 (LGL91_18045) | 77423..78967 | - | 1545 | WP_234057249.1 | Ribose import ATP-binding protein RbsA | VF |
| LGL91_RS17995 (LGL91_18050) | 79025..79954 | - | 930 | WP_234057250.1 | substrate-binding domain-containing protein | - |
| LGL91_RS18000 (LGL91_18055) | 79994..80980 | - | 987 | WP_234057251.1 | inositol 2-dehydrogenase | - |
| LGL91_RS18005 (LGL91_18060) | 81291..83216 | - | 1926 | WP_234057252.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| LGL91_RS18010 (LGL91_18065) | 83228..84733 | - | 1506 | WP_234057253.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|