MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP084529 Location: 3344615..3345763 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Accession: NZ_CP084529 Location: 3344615..3345763 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFW28_RS15880 (3339836) | 3339836..3340375 | + | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| LFW28_RS15885 (3340367) | 3340367..3341347 | - | 981 | WP_001234042.1 | YdcK family protein | - |
| LFW28_RS15890 (3341471) | 3341471..3342463 | + | 993 | WP_001301046.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LFW28_RS15895 (3342460) | 3342460..3343053 | + | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LFW28_RS15900 (3343355) | 3343355..3344023 | + | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LFW28_RS15905 (3344122) | 3344122..3344547 | - | 426 | Protein_3125 | IS200/IS605 family transposase | - |
| LFW28_RS15910 (3344555) | 3344555..3345763 | + | 1209 | WP_000826416.1 | IS200-IS605 family transposase IS609 | Transposase |
| LFW28_RS15915 (3345803) | 3345803..3347017 | - | 1215 | WP_001326689.1 | BenE family transporter YdcO | - |
| LFW28_RS15920 (3347070) | 3347070..3347606 | + | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LFW28_RS15925 (3347679) | 3347679..3349640 | + | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LFW28_RS15930 (3349732) | 3349732..3349962 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| LFW28_RS15935 (3350184) | 3350184..3350360 | + | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |