MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NZ_CP084096 Location: 3584817..3586037 Organism: Escherichia coli O78 strain 3 Replicon: chromosome
Accession: NZ_CP084096 Location: 3584817..3586037 Organism: Escherichia coli O78 strain 3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCF29_RS17280 (3580002) | 3580002..3580370 | + | 369 | WP_053882193.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LCF29_RS17285 (3580459) | 3580459..3580833 | + | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| LCF29_RS17290 (3580830) | 3580830..3581024 | + | 195 | WP_039023483.1 | DUF5983 family protein | - |
| LCF29_RS17295 (3581070) | 3581070..3581150 | + | 81 | Protein_3390 | hypothetical protein | - |
| LCF29_RS17300 (3581439) | 3581439..3581519 | - | 81 | WP_023441679.1 | hypothetical protein | - |
| LCF29_RS17305 (3581498) | 3581498..3581821 | + | 324 | WP_225343796.1 | EutP/PduV family microcompartment system protein | - |
| LCF29_RS17310 (3581922) | 3581922..3582251 | - | 330 | WP_000450409.1 | DUF496 family protein | - |
| LCF29_RS17315 (3582423) | 3582423..3583481 | - | 1059 | WP_001200891.1 | FUSC family protein | - |
| LCF29_RS17320 (3583679) | 3583679..3584152 | - | 474 | WP_024222062.1 | DNA gyrase inhibitor SbmC | - |
| LCF29_RS17325 (3584280) | 3584280..3584798 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| LCF29_RS17330 (3584817) | 3584817..3586037 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| LCF29_RS17335 (3586164) | 3586164..3587330 | - | 1167 | WP_039023538.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| LCF29_RS17340 (3587539) | 3587539..3588966 | + | 1428 | WP_000980589.1 | exodeoxyribonuclease I | - |
| LCF29_RS17345 (3589009) | 3589009..3589236 | - | 228 | WP_000234896.1 | sulfurtransferase TusA | - |
| LCF29_RS17350 (3589250) | 3589250..3590308 | - | 1059 | WP_000492340.1 | thiosulfate utilization transporter TsuA/YeeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | IS/Tn | TA47049 | NZ_CP007799 | 4503424..4504644 | 0.001 |