MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 169194 bp
Accession: NZ_CP084013        Location: 1..169194         Organism: Bifidobacterium longum strain NBRC 114370       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LCQ81_RS10485 (LCQ81_10485) 472..816 + 345 WP_007055834.1 hypothetical protein -
LCQ81_RS10490 (LCQ81_10490) 1039..1701 + 663 WP_007055827.1 ParA family protein -
LCQ81_RS10495 (LCQ81_10495) 1712..2095 + 384 WP_225090395.1 hypothetical protein -
LCQ81_RS10500 (LCQ81_10500) 2218..3432 + 1215 WP_225090396.1 hypothetical protein -
LCQ81_RS11585 3443..3577 + 135 WP_007055790.1 hypothetical protein -
LCQ81_RS10505 (LCQ81_10505) 3592..4584 + 993 WP_225090397.1 HNH endonuclease family protein -
LCQ81_RS10510 (LCQ81_10510) 4864..5136 + 273 WP_007058046.1 hypothetical protein -
LCQ81_RS10515 (LCQ81_10515) 5295..5585 + 291 WP_007055837.1 hypothetical protein -
LCQ81_RS10520 (LCQ81_10520) 5603..6355 + 753 WP_225090398.1 hypothetical protein -
LCQ81_RS10525 (LCQ81_10525) 6348..6728 + 381 WP_101014361.1 hypothetical protein -
LCQ81_RS10530 (LCQ81_10530) 6731..7084 + 354 WP_131206052.1 hypothetical protein -
LCQ81_RS10535 (LCQ81_10535) 7081..8310 - 1230 WP_131206053.1 IS200-IS605 family transposase ISMae41 Transposase
LCQ81_RS10540 (LCQ81_10540) 8703..9026 + 324 WP_225090436.1 hypothetical protein -
LCQ81_RS10545 (LCQ81_10545) 9023..9307 + 285 WP_131207562.1 hypothetical protein -
LCQ81_RS10550 (LCQ81_10550) 9317..9694 + 378 WP_007055787.1 hypothetical protein -
LCQ81_RS10555 (LCQ81_10555) 10023..10430 + 408 WP_131206056.1 IS200-IS605 family transposase ISCsa5 Transposase
LCQ81_RS10560 (LCQ81_10560) 10433..11602 + 1170 WP_131211871.1 IS200-IS605 family transposase IS1341 Transposase
LCQ81_RS10565 (LCQ81_10565) 12069..12863 + 795 WP_225090399.1 hypothetical protein -
LCQ81_RS10570 (LCQ81_10570) 12865..14199 - 1335 WP_225090400.1 IS200-IS605 family transposase ISFac11 Transposase
LCQ81_RS10575 (LCQ81_10575) 14261..14698 + 438 WP_100991546.1 IS200-IS605 family transposase ISMba17 Transposase
LCQ81_RS10580 (LCQ81_10580) 14735..15187 + 453 WP_007056642.1 phage N-6-adenine-methyltransferase -
LCQ81_RS10585 (LCQ81_10585) 15200..15616 - 417 WP_080826695.1 IS200-IS605 family transposase ISAba30 Transposase
LCQ81_RS10590 (LCQ81_10590) 15640..16926 + 1287 WP_032736914.1 IS200-IS605 family transposase ISMae41 Transposase
LCQ81_RS10595 (LCQ81_10595) 16989..18302 - 1314 WP_225090401.1 zinc ribbon domain-containing protein -
LCQ81_RS10600 (LCQ81_10600) 18316..18732 - 417 WP_225090402.1 ImmA/IrrE family metallo-endopeptidase -
LCQ81_RS10605 (LCQ81_10605) 18834..19406 - 573 WP_131277389.1 hypothetical protein -
LCQ81_RS10610 (LCQ81_10610) 19546..19809 + 264 WP_131277394.1 hypothetical protein -
LCQ81_RS10615 (LCQ81_10615) 19836..21077 + 1242 WP_225090403.1 hypothetical protein -
LCQ81_RS10620 (LCQ81_10620) 21067..21603 + 537 WP_007058063.1 hypothetical protein -
LCQ81_RS10625 (LCQ81_10625) 21675..22115 + 441 WP_007055805.1 hypothetical protein -
LCQ81_RS10630 (LCQ81_10630) 22257..24584 + 2328 WP_225090404.1 hypothetical protein -
LCQ81_RS10635 (LCQ81_10635) 24681..26225 + 1545 WP_225090405.1 hypothetical protein -
LCQ81_RS10640 (LCQ81_10640) 26634..26777 + 144 WP_225090406.1 hypothetical protein -
LCQ81_RS10645 (LCQ81_10645) 26878..33840 + 6963 WP_225090407.1 hypothetical protein VF
LCQ81_RS10650 (LCQ81_10650) 33989..34891 + 903 WP_225090437.1 colicin transporter -
LCQ81_RS10655 (LCQ81_10655) 35246..36271 + 1026 WP_225090408.1 hypothetical protein -
LCQ81_RS10660 (LCQ81_10660) 36428..36793 - 366 WP_225090409.1 hypothetical protein -
LCQ81_RS10665 (LCQ81_10665) 36816..37196 - 381 WP_065436688.1 hypothetical protein -
LCQ81_RS10670 (LCQ81_10670) 37379..37645 + 267 WP_065436689.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
LCQ81_RS10675 (LCQ81_10675) 37645..37899 + 255 WP_065436690.1 Txe/YoeB family addiction module toxin Toxin Detail
LCQ81_RS10680 (LCQ81_10680) 37936..42588 + 4653 WP_225090410.1 InlB B-repeat-containing protein -
LCQ81_RS10685 (LCQ81_10685) 42585..43562 + 978 WP_225090411.1 hypothetical protein VF
LCQ81_RS10690 (LCQ81_10690) 43669..46617 + 2949 WP_225090412.1 CAP domain-containing protein -
LCQ81_RS10695 (LCQ81_10695) 46767..47084 + 318 WP_100991534.1 HigA family addiction module antitoxin -
LCQ81_RS10700 (LCQ81_10700) 47380..48423 - 1044 WP_225090438.1 site-specific DNA-methyltransferase -
LCQ81_RS10705 (LCQ81_10705) 48642..49814 - 1173 WP_225090413.1 IS200-IS605 family transposase ISEfa4 Transposase
LCQ81_RS10710 (LCQ81_10710) 49811..50254 - 444 WP_131207519.1 IS200-IS605 family transposase ISMma22 Transposase
LCQ81_RS10715 (LCQ81_10715) 50362..50952 - 591 WP_131308725.1 single-stranded DNA-binding protein -
LCQ81_RS10720 (LCQ81_10720) 51153..54128 - 2976 WP_225090414.1 cell surface protein -
LCQ81_RS10725 (LCQ81_10725) 54399..55427 + 1029 WP_131205998.1 hypothetical protein -
LCQ81_RS10730 (LCQ81_10730) 55520..55744 - 225 WP_207389049.1 hypothetical protein -
LCQ81_RS10735 (LCQ81_10735) 56002..56424 + 423 WP_225090415.1 hypothetical protein -
LCQ81_RS10740 (LCQ81_10740) 56453..57505 - 1053 WP_225090416.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
LCQ81_RS10745 (LCQ81_10745) 57492..58031 - 540 WP_131205996.1 hypothetical protein -
LCQ81_RS10750 (LCQ81_10750) 58112..58297 - 186 Protein_55 thymidylate synthase -
LCQ81_RS10755 (LCQ81_10755) 58443..58814 - 372 WP_165501483.1 hypothetical protein -
LCQ81_RS10760 (LCQ81_10760) 58814..59089 - 276 WP_225090417.1 hypothetical protein -
LCQ81_RS10765 (LCQ81_10765) 59101..59367 - 267 WP_131223567.1 hypothetical protein -
LCQ81_RS10770 (LCQ81_10770) 59371..59901 - 531 WP_131224722.1 hypothetical protein -
LCQ81_RS11590 59901..60029 - 129 WP_257617479.1 hypothetical protein -
LCQ81_RS10775 (LCQ81_10775) 60026..60343 - 318 WP_225090418.1 hypothetical protein -
LCQ81_RS10780 (LCQ81_10780) 60325..60864 - 540 WP_225090419.1 hypothetical protein -
LCQ81_RS10785 (LCQ81_10785) 60845..61399 - 555 WP_225090420.1 hypothetical protein -
LCQ81_RS10790 (LCQ81_10790) 61393..61635 - 243 WP_007055009.1 hypothetical protein -
LCQ81_RS10795 (LCQ81_10795) 61632..62393 - 762 WP_225090421.1 hypothetical protein -
LCQ81_RS10800 (LCQ81_10800) 62374..62691 - 318 WP_225090422.1 hypothetical protein -
LCQ81_RS10805 (LCQ81_10805) 62691..63032 - 342 WP_225090423.1 hypothetical protein -
LCQ81_RS10810 (LCQ81_10810) 63035..63304 - 270 WP_117768714.1 hypothetical protein -
LCQ81_RS10815 (LCQ81_10815) 63425..63562 - 138 WP_165505790.1 hypothetical protein -
LCQ81_RS10820 (LCQ81_10820) 63771..64781 + 1011 WP_131205990.1 hypothetical protein -
LCQ81_RS10825 (LCQ81_10825) 64796..65458 + 663 WP_131205989.1 hypothetical protein -
LCQ81_RS10830 (LCQ81_10830) 65458..66222 + 765 WP_131205999.1 metallophosphoesterase -
LCQ81_RS10835 (LCQ81_10835) 66308..66991 + 684 WP_007058222.1 hypothetical protein -
LCQ81_RS10845 (LCQ81_10845) 67402..67593 + 192 WP_007058228.1 hypothetical protein -
LCQ81_RS10850 (LCQ81_10850) 67694..68239 + 546 WP_131205988.1 hypothetical protein -
LCQ81_RS10855 (LCQ81_10855) 68243..68866 + 624 WP_100991495.1 hypothetical protein -
LCQ81_RS10860 (LCQ81_10860) 68863..69201 + 339 WP_131205987.1 hypothetical protein -
LCQ81_RS10865 (LCQ81_10865) 69214..69483 + 270 WP_131301864.1 hypothetical protein -
LCQ81_RS10870 (LCQ81_10870) 69492..70040 + 549 WP_131224720.1 hypothetical protein -
LCQ81_RS10875 (LCQ81_10875) 70037..70456 + 420 WP_007054985.1 hypothetical protein -
LCQ81_RS10880 (LCQ81_10880) 70453..71241 + 789 WP_225090424.1 hypothetical protein -
LCQ81_RS10885 (LCQ81_10885) 71238..71894 + 657 WP_225090425.1 hypothetical protein -
LCQ81_RS10890 (LCQ81_10890) 72128..73147 + 1020 WP_225090426.1 sortase -
LCQ81_RS10895 (LCQ81_10895) 73274..73909 - 636 WP_225090427.1 putative endopeptidase p60 VF
LCQ81_RS10900 (LCQ81_10900) 73959..74507 - 549 WP_225090428.1 N-acetylmuramoyl-L-alanine amidase domain-containing protein VF
LCQ81_RS10905 (LCQ81_10905) 74708..75019 - 312 WP_007055002.1 hypothetical protein -
LCQ81_RS10910 (LCQ81_10910) 75242..75835 + 594 WP_225090429.1 IS607 family transposase ISBlo12 Transposase
LCQ81_RS10915 (LCQ81_10915) 75822..77144 + 1323 WP_225090430.1 IS607 family transposase ISBlo12 Transposase
LCQ81_RS10920 (LCQ81_10920) 77163..77441 - 279 WP_225090431.1 hypothetical protein -
LCQ81_RS10925 (LCQ81_10925) 77438..77932 - 495 WP_225090432.1 hypothetical protein -
LCQ81_RS10930 (LCQ81_10930) 78012..78608 - 597 WP_101026240.1 hypothetical protein -
LCQ81_RS10935 (LCQ81_10935) 78665..79024 + 360 WP_032737050.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LCQ81_RS10940 (LCQ81_10940) 79021..79329 + 309 WP_007056001.1 helix-turn-helix domain-containing protein Antitoxin Detail
LCQ81_RS10945 (LCQ81_10945) 79344..79631 - 288 WP_007055993.1 hypothetical protein -
LCQ81_RS10950 (LCQ81_10950) 80146..81342 + 1197 WP_225090433.1 IS200-IS605 family transposase ISDge19 Transposase
LCQ81_RS10955 (LCQ81_10955) 81508..81801 - 294 WP_007058386.1 hypothetical protein -
LCQ81_RS10960 (LCQ81_10960) 82222..82548 + 327 WP_124226571.1 hypothetical protein -
LCQ81_RS10965 (LCQ81_10965) 82564..83040 + 477 WP_225090434.1 hypothetical protein -
LCQ81_RS10970 (LCQ81_10970) 83108..83953 + 846 WP_225090435.1 hypothetical protein -
LCQ81_RS10975 (LCQ81_10975) 84038..84394 + 357 WP_115779380.1 hypothetical protein -
LCQ81_RS10980 (LCQ81_10980) 84457..84894 - 438 WP_131218370.1 hypothetical protein -
LCQ81_RS10985 (LCQ81_10985) 84897..87686 - 2790 WP_225090360.1 N-6 DNA methylase -
LCQ81_RS10990 (LCQ81_10990) 87712..88302 - 591 WP_225090361.1 DUF3841 domain-containing protein -
LCQ81_RS10995 (LCQ81_10995) 88327..88674 - 348 WP_131224654.1 hypothetical protein -
LCQ81_RS11000 (LCQ81_11000) 88838..89116 + 279 WP_032740723.1 DUF1778 domain-containing protein -
LCQ81_RS11005 (LCQ81_11005) 89113..89604 + 492 WP_131223490.1 GNAT family N-acetyltransferase -
LCQ81_RS11010 (LCQ81_11010) 89601..90149 - 549 WP_225090362.1 hypothetical protein -
LCQ81_RS11015 (LCQ81_11015) 90296..90847 - 552 WP_131223489.1 hypothetical protein -
LCQ81_RS11020 (LCQ81_11020) 90840..92021 - 1182 WP_007058389.1 AAA family ATPase -
LCQ81_RS11025 (LCQ81_11025) 91969..93147 - 1179 WP_225090363.1 ATP-grasp domain-containing protein -
LCQ81_RS11030 (LCQ81_11030) 93144..94568 - 1425 WP_225090364.1 hypothetical protein -
LCQ81_RS11035 (LCQ81_11035) 94565..95038 - 474 WP_117773029.1 hypothetical protein -
LCQ81_RS11040 (LCQ81_11040) 95191..95475 + 285 WP_101011458.1 hypothetical protein -
LCQ81_RS11045 (LCQ81_11045) 95468..95770 + 303 WP_052791182.1 type II toxin-antitoxin system YafQ family toxin -
LCQ81_RS11050 (LCQ81_11050) 95776..96108 - 333 WP_225090365.1 hypothetical protein -
LCQ81_RS11055 (LCQ81_11055) 96221..96808 + 588 WP_100991622.1 IS607 family transposase ISCARN1 Transposase
LCQ81_RS11060 (LCQ81_11060) 96792..98243 + 1452 WP_157823306.1 IS607 family transposase ISCARN1 Transposase
LCQ81_RS11065 (LCQ81_11065) 98221..98454 - 234 WP_225090366.1 Lar family restriction alleviation protein -
LCQ81_RS11070 (LCQ81_11070) 98454..99461 - 1008 WP_225090367.1 hypothetical protein -
LCQ81_RS11075 (LCQ81_11075) 99458..99685 - 228 WP_131223512.1 hypothetical protein -
LCQ81_RS11080 (LCQ81_11080) 99682..100149 - 468 WP_225090368.1 hypothetical protein -
LCQ81_RS11085 (LCQ81_11085) 100146..100838 - 693 WP_116464277.1 hypothetical protein -
LCQ81_RS11595 100947..101081 - 135 WP_259306101.1 hypothetical protein -
LCQ81_RS11090 (LCQ81_11090) 101331..102191 - 861 WP_131223513.1 hypothetical protein -
LCQ81_RS11095 (LCQ81_11095) 102178..102489 - 312 WP_131290328.1 hypothetical protein -
LCQ81_RS11100 (LCQ81_11100) 102464..104251 - 1788 WP_131276788.1 RNA ligase -
LCQ81_RS11105 (LCQ81_11105) 104272..104970 - 699 WP_131276791.1 metallophosphoesterase -
LCQ81_RS11110 (LCQ81_11110) 104995..105405 - 411 WP_225090369.1 hypothetical protein -
LCQ81_RS11115 (LCQ81_11115) 105516..106001 + 486 WP_077384761.1 hypothetical protein -
LCQ81_RS11120 (LCQ81_11120) 105998..106783 + 786 WP_225090370.1 hypothetical protein -
LCQ81_RS11125 (LCQ81_11125) 106776..106946 + 171 WP_225090371.1 hypothetical protein -
LCQ81_RS11130 (LCQ81_11130) 107205..107795 + 591 WP_225090372.1 3'-5' exonuclease -
LCQ81_RS11135 (LCQ81_11135) 107868..108491 + 624 WP_101011406.1 IS607 family transposase ISNma20 Transposase
LCQ81_RS11140 (LCQ81_11140) 108488..110146 + 1659 WP_225090373.1 IS200-IS605 family transposase ISHtu6 Transposase
LCQ81_RS11145 (LCQ81_11145) 110271..110576 + 306 WP_157823309.1 hypothetical protein -
LCQ81_RS11150 (LCQ81_11150) 110573..110902 + 330 WP_165540943.1 hypothetical protein -
LCQ81_RS11155 (LCQ81_11155) 111212..111694 + 483 WP_225090374.1 hypothetical protein -
LCQ81_RS11160 (LCQ81_11160) 111811..112209 + 399 WP_007056013.1 IS200-IS605 family transposase ISCsa5 Transposase
LCQ81_RS11165 (LCQ81_11165) 112224..113345 + 1122 WP_007055981.1 IS200-IS605 family transposase ISHaha9 Transposase
LCQ81_RS11170 (LCQ81_11170) 113519..114049 + 531 WP_007055992.1 hypothetical protein -
LCQ81_RS11175 (LCQ81_11175) 114052..114378 + 327 WP_007056005.1 hypothetical protein -
LCQ81_RS11180 (LCQ81_11180) 114509..118828 + 4320 WP_174768570.1 ATP-binding protein -
LCQ81_RS11185 (LCQ81_11185) 118835..119596 + 762 WP_007057249.1 hypothetical protein -
LCQ81_RS11190 (LCQ81_11190) 119662..120963 + 1302 WP_225090375.1 phage tail tip lysozyme -
LCQ81_RS11195 (LCQ81_11195) 120960..121931 - 972 WP_131223517.1 hypothetical protein -
LCQ81_RS11200 (LCQ81_11200) 122057..122509 - 453 WP_225090376.1 hypothetical protein -
LCQ81_RS11205 (LCQ81_11205) 122635..123933 - 1299 WP_225090377.1 HipA domain-containing protein -
LCQ81_RS11210 (LCQ81_11210) 123930..124226 - 297 WP_225090378.1 hypothetical protein -
LCQ81_RS11215 (LCQ81_11215) 124235..124516 - 282 WP_007058112.1 ribbon-helix-helix protein, CopG family -
LCQ81_RS11220 (LCQ81_11220) 124513..124782 - 270 WP_131211821.1 hypothetical protein -
LCQ81_RS11225 (LCQ81_11225) 124896..125945 - 1050 WP_131211820.1 replication protein RepA -
LCQ81_RS11230 (LCQ81_11230) 126757..130017 + 3261 WP_225090379.1 FtsK/SpoIIIE domain-containing protein -
LCQ81_RS11235 (LCQ81_11235) 130042..130761 + 720 WP_225090380.1 hypothetical protein -
LCQ81_RS11240 (LCQ81_11240) 130761..132608 + 1848 WP_100991673.1 cell division protein FtsK -
LCQ81_RS11245 (LCQ81_11245) 132623..134884 + 2262 WP_225090381.1 hypothetical protein -
LCQ81_RS11250 (LCQ81_11250) 134988..136163 - 1176 WP_225090382.1 DUF2815 domain-containing protein -
LCQ81_RS11255 (LCQ81_11255) 136436..137083 + 648 WP_007056000.1 helix-turn-helix transcriptional regulator -
LCQ81_RS11260 (LCQ81_11260) 137159..138088 + 930 WP_131224675.1 PD-(D/E)XK nuclease-like domain-containing protein -
LCQ81_RS11265 (LCQ81_11265) 138348..139253 + 906 WP_225090383.1 hypothetical protein -
LCQ81_RS11270 (LCQ81_11270) 139597..141129 + 1533 WP_131211814.1 hypothetical protein -
LCQ81_RS11275 (LCQ81_11275) 141236..142459 - 1224 WP_225090384.1 IS200-IS605 family transposase ISDge19 Transposase
LCQ81_RS11280 (LCQ81_11280) 142681..143505 + 825 WP_225090385.1 cell division protein DivIVA -
LCQ81_RS11285 (LCQ81_11285) 143554..143763 + 210 WP_225090386.1 hypothetical protein -
LCQ81_RS11290 (LCQ81_11290) 143756..143977 + 222 WP_007055581.1 preprotein translocase subunit SecE -
LCQ81_RS11295 (LCQ81_11295) 143974..144183 + 210 WP_007055588.1 hypothetical protein -
LCQ81_RS11300 (LCQ81_11300) 144159..144401 + 243 WP_007055584.1 preprotein translocase subunit SecG -
LCQ81_RS11305 (LCQ81_11305) 144525..144707 + 183 WP_007058115.1 hypothetical protein -
LCQ81_RS11310 (LCQ81_11310) 144704..146404 + 1701 WP_225090387.1 DNA cytosine methyltransferase -
LCQ81_RS11315 (LCQ81_11315) 147205..148185 - 981 WP_195403803.1 replication protein RepA -
LCQ81_RS11430 (LCQ81_11430) 154294..155526 - 1233 WP_065445495.1 ISL3 family transposase ISBlo6 Transposase
LCQ81_RS11435 (LCQ81_11435) 155810..156091 - 282 WP_225090388.1 hypothetical protein -
LCQ81_RS11440 (LCQ81_11440) 156101..156769 - 669 WP_007055825.1 hypothetical protein -
LCQ81_RS11445 (LCQ81_11445) 157035..157445 + 411 WP_225090389.1 hypothetical protein -
LCQ81_RS11450 (LCQ81_11450) 157833..158666 + 834 WP_225090390.1 hypothetical protein -
LCQ81_RS11455 (LCQ81_11455) 158733..159401 - 669 WP_007055829.1 hypothetical protein -
LCQ81_RS11460 (LCQ81_11460) 159913..161196 + 1284 WP_225090391.1 cobalamin biosynthesis protein CobQ -
LCQ81_RS11465 (LCQ81_11465) 161189..162391 + 1203 WP_007058067.1 hypothetical protein -
LCQ81_RS11470 (LCQ81_11470) 162366..162830 + 465 WP_225090392.1 hypothetical protein -
LCQ81_RS11475 (LCQ81_11475) 162846..165461 + 2616 WP_225090393.1 AAA family ATPase -
LCQ81_RS11480 (LCQ81_11480) 165660..166007 + 348 WP_007055856.1 hypothetical protein -
LCQ81_RS11485 (LCQ81_11485) 166059..166427 + 369 WP_100991564.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance