MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP083880 Location: 2410005..2411153 Organism: Escherichia coli strain NDM3 Replicon: chromosome
Accession: NZ_CP083880 Location: 2410005..2411153 Organism: Escherichia coli strain NDM3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE26_RS11575 (2405408) | 2405408..2405584 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LCE26_RS11580 (2405806) | 2405806..2406036 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LCE26_RS11585 (2406128) | 2406128..2408089 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LCE26_RS11590 (2408162) | 2408162..2408698 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LCE26_RS11595 (2408790) | 2408790..2409965 | + | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| LCE26_RS11600 (2410005) | 2410005..2411213 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| LCE26_RS11605 (2411221) | 2411221..2411646 | + | 426 | Protein_2268 | IS200/IS605 family transposase | - |
| LCE26_RS11610 (2411745) | 2411745..2412413 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LCE26_RS11615 (2412715) | 2412715..2413308 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LCE26_RS11620 (2413305) | 2413305..2414297 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LCE26_RS11625 (2414421) | 2414421..2415401 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| LCE26_RS11630 (2415393) | 2415393..2415932 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |