MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP083872 Location: 2382545..2383693 Organism: Escherichia coli strain NDM5 Replicon: chromosome
Accession: NZ_CP083872 Location: 2382545..2383693 Organism: Escherichia coli strain NDM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE27_RS11450 (2377948) | 2377948..2378124 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LCE27_RS11455 (2378346) | 2378346..2378576 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LCE27_RS11460 (2378668) | 2378668..2380629 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LCE27_RS11465 (2380702) | 2380702..2381238 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LCE27_RS11470 (2381291) | 2381291..2382505 | + | 1215 | WP_001326689.1 | BenE family transporter YdcO | - |
| LCE27_RS11475 (2382545) | 2382545..2383753 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| LCE27_RS11480 (2383761) | 2383761..2384186 | + | 426 | Protein_2244 | IS200/IS605 family transposase | - |
| LCE27_RS11485 (2384285) | 2384285..2384953 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LCE27_RS11490 (2385255) | 2385255..2385848 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LCE27_RS11495 (2385845) | 2385845..2386837 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LCE27_RS11500 (2386961) | 2386961..2387941 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| LCE27_RS11505 (2387933) | 2387933..2388472 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |