MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP083869 Location: 2407928..2409076 Organism: Escherichia coli strain NDM6 Replicon: chromosome
Accession: NZ_CP083869 Location: 2407928..2409076 Organism: Escherichia coli strain NDM6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE24_RS12910 (2403331) | 2403331..2403507 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LCE24_RS12915 (2403729) | 2403729..2403959 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LCE24_RS12920 (2404051) | 2404051..2406012 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LCE24_RS12925 (2406085) | 2406085..2406621 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LCE24_RS12930 (2406713) | 2406713..2407888 | + | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| LCE24_RS12935 (2407928) | 2407928..2409136 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| LCE24_RS12940 (2409144) | 2409144..2409569 | + | 426 | Protein_2266 | IS200/IS605 family transposase | - |
| LCE24_RS12945 (2409668) | 2409668..2410336 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LCE24_RS12950 (2410638) | 2410638..2411231 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| LCE24_RS12955 (2411228) | 2411228..2412220 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LCE24_RS12960 (2412344) | 2412344..2413324 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| LCE24_RS12965 (2413316) | 2413316..2413855 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |